Gene : Thecc1EG040363 T. cacao v1.1
Defline:  (1 of 3) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Genomic Order:  2147
Name:  ? Thecc1EG040363 Secondary Identifier:  ? PAC:27427951
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6773 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040363 0.5kb upstream 0.5kb upstream 54606 true scaffold_9: 29429758-29484363 Theobroma cacao
Thecc1EG040363 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 29429758-29430257 Theobroma cacao
Thecc1EG040363 0.5kb downstream 0.5kb downstream 54606 true scaffold_9: 29430258-29484863 Theobroma cacao
Thecc1EG040363 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 29484364-29484863 Theobroma cacao
Thecc1EG040363 1.0kb upstream 1.0kb upstream 55106 true scaffold_9: 29429258-29484363 Theobroma cacao
Thecc1EG040363 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 29429258-29430257 Theobroma cacao
Thecc1EG040363 1.0kb downstream 1.0kb downstream 55106 true scaffold_9: 29430258-29485363 Theobroma cacao
Thecc1EG040363 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 29484364-29485363 Theobroma cacao
Thecc1EG040363 2.0kb upstream 2.0kb upstream 56106 true scaffold_9: 29428258-29484363 Theobroma cacao
Thecc1EG040363 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 29428258-29430257 Theobroma cacao
Thecc1EG040363 2.0kb downstream 2.0kb downstream 56106 true scaffold_9: 29430258-29486363 Theobroma cacao
Thecc1EG040363 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 29484364-29486363 Theobroma cacao
Thecc1EG040363 5.0kb upstream 5.0kb upstream 59106 true scaffold_9: 29425258-29484363 Theobroma cacao
Thecc1EG040363 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 29425258-29430257 Theobroma cacao
Thecc1EG040363 5.0kb downstream 5.0kb downstream 59106 true scaffold_9: 29430258-29489363 Theobroma cacao
Thecc1EG040363 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 29484364-29489363 Theobroma cacao
Thecc1EG040363 10.0kb upstream 10.0kb upstream 64106 true scaffold_9: 29420258-29484363 Theobroma cacao
Thecc1EG040363 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 29420258-29430257 Theobroma cacao
Thecc1EG040363 10.0kb downstream 10.0kb downstream 64106 true scaffold_9: 29430258-29494363 Theobroma cacao
Thecc1EG040363 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 29484364-29494363 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842189 5264 Brassicales-Malvales View MSA
124351850 5266 SBM View MSA
124252791 5268 Malvidae View MSA
124051035 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain