Gene : Thecc1EG040384 T. cacao v1.1
Defline:  (1 of 2) K10256 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD2) Genomic Order:  2152
Name:  ? Thecc1EG040384 Secondary Identifier:  ? PAC:27427492
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5995 Theobroma cacao pathologic  
Tcacao PWY-762 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040384 0.5kb upstream 0.5kb upstream 4270 true scaffold_9: 29749254-29753523 Theobroma cacao
Thecc1EG040384 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 29753024-29753523 Theobroma cacao
Thecc1EG040384 0.5kb downstream 0.5kb downstream 4270 true scaffold_9: 29748754-29753023 Theobroma cacao
Thecc1EG040384 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 29748754-29749253 Theobroma cacao
Thecc1EG040384 1.0kb upstream 1.0kb upstream 4770 true scaffold_9: 29749254-29754023 Theobroma cacao
Thecc1EG040384 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 29753024-29754023 Theobroma cacao
Thecc1EG040384 1.0kb downstream 1.0kb downstream 4770 true scaffold_9: 29748254-29753023 Theobroma cacao
Thecc1EG040384 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 29748254-29749253 Theobroma cacao
Thecc1EG040384 2.0kb upstream 2.0kb upstream 5770 true scaffold_9: 29749254-29755023 Theobroma cacao
Thecc1EG040384 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 29753024-29755023 Theobroma cacao
Thecc1EG040384 2.0kb downstream 2.0kb downstream 5770 true scaffold_9: 29747254-29753023 Theobroma cacao
Thecc1EG040384 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 29747254-29749253 Theobroma cacao
Thecc1EG040384 5.0kb upstream 5.0kb upstream 8770 true scaffold_9: 29749254-29758023 Theobroma cacao
Thecc1EG040384 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 29753024-29758023 Theobroma cacao
Thecc1EG040384 5.0kb downstream 5.0kb downstream 8770 true scaffold_9: 29744254-29753023 Theobroma cacao
Thecc1EG040384 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 29744254-29749253 Theobroma cacao
Thecc1EG040384 10.0kb upstream 10.0kb upstream 13770 true scaffold_9: 29749254-29763023 Theobroma cacao
Thecc1EG040384 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 29753024-29763023 Theobroma cacao
Thecc1EG040384 10.0kb downstream 10.0kb downstream 13770 true scaffold_9: 29739254-29753023 Theobroma cacao
Thecc1EG040384 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 29739254-29749253 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
123825145 5264 Brassicales-Malvales View MSA
124349228 5266 SBM View MSA
124247133 5268 Malvidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain