Gene : Thecc1EG040356 T. cacao v1.1
Defline:  (1 of 3) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Genomic Order:  2144
Name:  ? Thecc1EG040356 Secondary Identifier:  ? PAC:27428847
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6773 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040356 0.5kb upstream 0.5kb upstream 26581 true scaffold_9: 29342646-29369226 Theobroma cacao
Thecc1EG040356 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 29342646-29343145 Theobroma cacao
Thecc1EG040356 0.5kb downstream 0.5kb downstream 26581 true scaffold_9: 29343146-29369726 Theobroma cacao
Thecc1EG040356 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 29369227-29369726 Theobroma cacao
Thecc1EG040356 1.0kb upstream 1.0kb upstream 27081 true scaffold_9: 29342146-29369226 Theobroma cacao
Thecc1EG040356 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 29342146-29343145 Theobroma cacao
Thecc1EG040356 1.0kb downstream 1.0kb downstream 27081 true scaffold_9: 29343146-29370226 Theobroma cacao
Thecc1EG040356 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 29369227-29370226 Theobroma cacao
Thecc1EG040356 2.0kb upstream 2.0kb upstream 28081 true scaffold_9: 29341146-29369226 Theobroma cacao
Thecc1EG040356 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 29341146-29343145 Theobroma cacao
Thecc1EG040356 2.0kb downstream 2.0kb downstream 28081 true scaffold_9: 29343146-29371226 Theobroma cacao
Thecc1EG040356 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 29369227-29371226 Theobroma cacao
Thecc1EG040356 5.0kb upstream 5.0kb upstream 31081 true scaffold_9: 29338146-29369226 Theobroma cacao
Thecc1EG040356 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 29338146-29343145 Theobroma cacao
Thecc1EG040356 5.0kb downstream 5.0kb downstream 31081 true scaffold_9: 29343146-29374226 Theobroma cacao
Thecc1EG040356 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 29369227-29374226 Theobroma cacao
Thecc1EG040356 10.0kb upstream 10.0kb upstream 36081 true scaffold_9: 29333146-29369226 Theobroma cacao
Thecc1EG040356 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 29333146-29343145 Theobroma cacao
Thecc1EG040356 10.0kb downstream 10.0kb downstream 36081 true scaffold_9: 29343146-29379226 Theobroma cacao
Thecc1EG040356 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 29369227-29379226 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839763 5264 Brassicales-Malvales View MSA
124346959 5266 SBM View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain