Gene : Thecc1EG040351 T. cacao v1.1
Defline:  (1 of 2) PTHR10353//PTHR10353:SF81 - GLYCOSYL HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  2142
Name:  ? Thecc1EG040351 Secondary Identifier:  ? PAC:27430663
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5176 Theobroma cacao pathologic  
Tcacao PWY-7089 Theobroma cacao pathologic  
Tcacao PWY-7091 Theobroma cacao pathologic  
Tcacao PWY-7092 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040351 0.5kb upstream 0.5kb upstream 1165654 true scaffold_9: 29271022-30436675 Theobroma cacao
Thecc1EG040351 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 29271022-29271521 Theobroma cacao
Thecc1EG040351 0.5kb downstream 0.5kb downstream 1165654 true scaffold_9: 29271522-30437175 Theobroma cacao
Thecc1EG040351 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 30436676-30437175 Theobroma cacao
Thecc1EG040351 1.0kb upstream 1.0kb upstream 1166154 true scaffold_9: 29270522-30436675 Theobroma cacao
Thecc1EG040351 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 29270522-29271521 Theobroma cacao
Thecc1EG040351 1.0kb downstream 1.0kb downstream 1166154 true scaffold_9: 29271522-30437675 Theobroma cacao
Thecc1EG040351 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 30436676-30437675 Theobroma cacao
Thecc1EG040351 2.0kb upstream 2.0kb upstream 1167154 true scaffold_9: 29269522-30436675 Theobroma cacao
Thecc1EG040351 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 29269522-29271521 Theobroma cacao
Thecc1EG040351 2.0kb downstream 2.0kb downstream 1167154 true scaffold_9: 29271522-30438675 Theobroma cacao
Thecc1EG040351 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 30436676-30438675 Theobroma cacao
Thecc1EG040351 5.0kb upstream 5.0kb upstream 1170154 true scaffold_9: 29266522-30436675 Theobroma cacao
Thecc1EG040351 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 29266522-29271521 Theobroma cacao
Thecc1EG040351 5.0kb downstream 5.0kb downstream 1170154 true scaffold_9: 29271522-30441675 Theobroma cacao
Thecc1EG040351 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 30436676-30441675 Theobroma cacao
Thecc1EG040351 10.0kb upstream 10.0kb upstream 1175154 true scaffold_9: 29261522-30436675 Theobroma cacao
Thecc1EG040351 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 29261522-29271521 Theobroma cacao
Thecc1EG040351 10.0kb downstream 10.0kb downstream 1175154 true scaffold_9: 29271522-30446675 Theobroma cacao
Thecc1EG040351 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 30436676-30446675 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691541 5273 Angiosperm View MSA
123839918 5264 Brassicales-Malvales View MSA
124322666 5266 SBM View MSA
124252768 5268 Malvidae View MSA
124073758 5270 Rosid View MSA
123647504 5271 Pentapetalae View MSA
122681476 5272 Eudicot View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain