Gene : Thecc1EG040844 T. cacao v1.1
Defline:  (1 of 1) 2.6.1.44//2.6.1.45//2.6.1.51 - Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase Genomic Order:  2406
Name:  ? Thecc1EG040844 Secondary Identifier:  ? PAC:27429095
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYSYN-ALA-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040844 0.5kb upstream 0.5kb upstream 5407 true scaffold_9: 33891709-33897115 Theobroma cacao
Thecc1EG040844 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33891709-33892208 Theobroma cacao
Thecc1EG040844 0.5kb downstream 0.5kb downstream 5407 true scaffold_9: 33892209-33897615 Theobroma cacao
Thecc1EG040844 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33897116-33897615 Theobroma cacao
Thecc1EG040844 1.0kb upstream 1.0kb upstream 5907 true scaffold_9: 33891209-33897115 Theobroma cacao
Thecc1EG040844 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33891209-33892208 Theobroma cacao
Thecc1EG040844 1.0kb downstream 1.0kb downstream 5907 true scaffold_9: 33892209-33898115 Theobroma cacao
Thecc1EG040844 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33897116-33898115 Theobroma cacao
Thecc1EG040844 2.0kb upstream 2.0kb upstream 6907 true scaffold_9: 33890209-33897115 Theobroma cacao
Thecc1EG040844 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33890209-33892208 Theobroma cacao
Thecc1EG040844 2.0kb downstream 2.0kb downstream 6907 true scaffold_9: 33892209-33899115 Theobroma cacao
Thecc1EG040844 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33897116-33899115 Theobroma cacao
Thecc1EG040844 5.0kb upstream 5.0kb upstream 9907 true scaffold_9: 33887209-33897115 Theobroma cacao
Thecc1EG040844 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33887209-33892208 Theobroma cacao
Thecc1EG040844 5.0kb downstream 5.0kb downstream 9907 true scaffold_9: 33892209-33902115 Theobroma cacao
Thecc1EG040844 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33897116-33902115 Theobroma cacao
Thecc1EG040844 10.0kb upstream 10.0kb upstream 14907 true scaffold_9: 33882209-33897115 Theobroma cacao
Thecc1EG040844 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33882209-33892208 Theobroma cacao
Thecc1EG040844 10.0kb downstream 10.0kb downstream 14907 true scaffold_9: 33892209-33907115 Theobroma cacao
Thecc1EG040844 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33897116-33907115 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836334 5264 Brassicales-Malvales View MSA
124344247 5266 SBM View MSA
124241250 5268 Malvidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain