Gene : Thecc1EG040801 T. cacao v1.1
Defline:  (1 of 1) K03404 - magnesium chelatase subunit D (chlD, bchD) Genomic Order:  2377
Name:  ? Thecc1EG040801 Secondary Identifier:  ? PAC:27427381
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CHLOROPHYLL-SYN Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040801 0.5kb upstream 0.5kb upstream 9497 true scaffold_9: 33497432-33506928 Theobroma cacao
Thecc1EG040801 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33506429-33506928 Theobroma cacao
Thecc1EG040801 0.5kb downstream 0.5kb downstream 9497 true scaffold_9: 33496932-33506428 Theobroma cacao
Thecc1EG040801 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33496932-33497431 Theobroma cacao
Thecc1EG040801 1.0kb upstream 1.0kb upstream 9997 true scaffold_9: 33497432-33507428 Theobroma cacao
Thecc1EG040801 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33506429-33507428 Theobroma cacao
Thecc1EG040801 1.0kb downstream 1.0kb downstream 9997 true scaffold_9: 33496432-33506428 Theobroma cacao
Thecc1EG040801 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33496432-33497431 Theobroma cacao
Thecc1EG040801 2.0kb upstream 2.0kb upstream 10997 true scaffold_9: 33497432-33508428 Theobroma cacao
Thecc1EG040801 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33506429-33508428 Theobroma cacao
Thecc1EG040801 2.0kb downstream 2.0kb downstream 10997 true scaffold_9: 33495432-33506428 Theobroma cacao
Thecc1EG040801 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33495432-33497431 Theobroma cacao
Thecc1EG040801 5.0kb upstream 5.0kb upstream 13997 true scaffold_9: 33497432-33511428 Theobroma cacao
Thecc1EG040801 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33506429-33511428 Theobroma cacao
Thecc1EG040801 5.0kb downstream 5.0kb downstream 13997 true scaffold_9: 33492432-33506428 Theobroma cacao
Thecc1EG040801 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33492432-33497431 Theobroma cacao
Thecc1EG040801 10.0kb upstream 10.0kb upstream 18997 true scaffold_9: 33497432-33516428 Theobroma cacao
Thecc1EG040801 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33506429-33516428 Theobroma cacao
Thecc1EG040801 10.0kb downstream 10.0kb downstream 18997 true scaffold_9: 33487432-33506428 Theobroma cacao
Thecc1EG040801 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33487432-33497431 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026552 5273 Angiosperm View MSA
123834198 5264 Brassicales-Malvales View MSA
124337971 5266 SBM View MSA
124238694 5268 Malvidae View MSA
124050211 5270 Rosid View MSA
123740767 5271 Pentapetalae View MSA
122793676 5272 Eudicot View MSA
121344824 5274 Embryophyte View MSA
123424530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain