Gene : Thecc1EG040797 T. cacao v1.1
Defline:  (1 of 2) K06688 - ubiquitin-conjugating enzyme E2 C (UBE2C, UBC11) Genomic Order:  2373
Name:  ? Thecc1EG040797 Secondary Identifier:  ? PAC:27430090
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040797 0.5kb upstream 0.5kb upstream 2622 true scaffold_9: 33468427-33471048 Theobroma cacao
Thecc1EG040797 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33470549-33471048 Theobroma cacao
Thecc1EG040797 0.5kb downstream 0.5kb downstream 2622 true scaffold_9: 33467927-33470548 Theobroma cacao
Thecc1EG040797 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33467927-33468426 Theobroma cacao
Thecc1EG040797 1.0kb upstream 1.0kb upstream 3122 true scaffold_9: 33468427-33471548 Theobroma cacao
Thecc1EG040797 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33470549-33471548 Theobroma cacao
Thecc1EG040797 1.0kb downstream 1.0kb downstream 3122 true scaffold_9: 33467427-33470548 Theobroma cacao
Thecc1EG040797 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33467427-33468426 Theobroma cacao
Thecc1EG040797 2.0kb upstream 2.0kb upstream 4122 true scaffold_9: 33468427-33472548 Theobroma cacao
Thecc1EG040797 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33470549-33472548 Theobroma cacao
Thecc1EG040797 2.0kb downstream 2.0kb downstream 4122 true scaffold_9: 33466427-33470548 Theobroma cacao
Thecc1EG040797 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33466427-33468426 Theobroma cacao
Thecc1EG040797 5.0kb upstream 5.0kb upstream 7122 true scaffold_9: 33468427-33475548 Theobroma cacao
Thecc1EG040797 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33470549-33475548 Theobroma cacao
Thecc1EG040797 5.0kb downstream 5.0kb downstream 7122 true scaffold_9: 33463427-33470548 Theobroma cacao
Thecc1EG040797 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33463427-33468426 Theobroma cacao
Thecc1EG040797 10.0kb upstream 10.0kb upstream 12122 true scaffold_9: 33468427-33480548 Theobroma cacao
Thecc1EG040797 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33470549-33480548 Theobroma cacao
Thecc1EG040797 10.0kb downstream 10.0kb downstream 12122 true scaffold_9: 33458427-33470548 Theobroma cacao
Thecc1EG040797 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33458427-33468426 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838520 5264 Brassicales-Malvales View MSA
124340055 5266 SBM View MSA
124250990 5268 Malvidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain