Gene : Thecc1EG040748 T. cacao v1.1
Defline:  (1 of 1) PTHR20275//PTHR20275:SF0 - FAMILY NOT NAMED // ATP-NADH KINASE YEF1-RELATED Genomic Order:  2340
Name:  ? Thecc1EG040748 Secondary Identifier:  ? PAC:27427029
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5083 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040748 0.5kb upstream 0.5kb upstream 18447 true scaffold_9: 33094072-33112518 Theobroma cacao
Thecc1EG040748 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33112019-33112518 Theobroma cacao
Thecc1EG040748 0.5kb downstream 0.5kb downstream 18447 true scaffold_9: 33093572-33112018 Theobroma cacao
Thecc1EG040748 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33093572-33094071 Theobroma cacao
Thecc1EG040748 1.0kb upstream 1.0kb upstream 18947 true scaffold_9: 33094072-33113018 Theobroma cacao
Thecc1EG040748 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33112019-33113018 Theobroma cacao
Thecc1EG040748 1.0kb downstream 1.0kb downstream 18947 true scaffold_9: 33093072-33112018 Theobroma cacao
Thecc1EG040748 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33093072-33094071 Theobroma cacao
Thecc1EG040748 2.0kb upstream 2.0kb upstream 19947 true scaffold_9: 33094072-33114018 Theobroma cacao
Thecc1EG040748 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33112019-33114018 Theobroma cacao
Thecc1EG040748 2.0kb downstream 2.0kb downstream 19947 true scaffold_9: 33092072-33112018 Theobroma cacao
Thecc1EG040748 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33092072-33094071 Theobroma cacao
Thecc1EG040748 5.0kb upstream 5.0kb upstream 22947 true scaffold_9: 33094072-33117018 Theobroma cacao
Thecc1EG040748 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33112019-33117018 Theobroma cacao
Thecc1EG040748 5.0kb downstream 5.0kb downstream 22947 true scaffold_9: 33089072-33112018 Theobroma cacao
Thecc1EG040748 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33089072-33094071 Theobroma cacao
Thecc1EG040748 10.0kb upstream 10.0kb upstream 27947 true scaffold_9: 33094072-33122018 Theobroma cacao
Thecc1EG040748 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33112019-33122018 Theobroma cacao
Thecc1EG040748 10.0kb downstream 10.0kb downstream 27947 true scaffold_9: 33084072-33112018 Theobroma cacao
Thecc1EG040748 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33084072-33094071 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838128 5264 Brassicales-Malvales View MSA
124336611 5266 SBM View MSA
124238337 5268 Malvidae View MSA
124071172 5270 Rosid View MSA
123745020 5271 Pentapetalae View MSA
122792103 5272 Eudicot View MSA
122043063 5273 Angiosperm View MSA
121344083 5274 Embryophyte View MSA
123427357 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain