Gene : Thecc1EG040747 T. cacao v1.1
Defline:  (1 of 2) PTHR10811:SF16 - FRINGE-LIKE PROTEIN Genomic Order:  2339
Name:  ? Thecc1EG040747 Secondary Identifier:  ? PAC:27430786
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040747 0.5kb upstream 0.5kb upstream 1831 true scaffold_9: 33091939-33093769 Theobroma cacao
Thecc1EG040747 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33093270-33093769 Theobroma cacao
Thecc1EG040747 0.5kb downstream 0.5kb downstream 1831 true scaffold_9: 33091439-33093269 Theobroma cacao
Thecc1EG040747 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33091439-33091938 Theobroma cacao
Thecc1EG040747 1.0kb upstream 1.0kb upstream 2331 true scaffold_9: 33091939-33094269 Theobroma cacao
Thecc1EG040747 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33093270-33094269 Theobroma cacao
Thecc1EG040747 1.0kb downstream 1.0kb downstream 2331 true scaffold_9: 33090939-33093269 Theobroma cacao
Thecc1EG040747 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33090939-33091938 Theobroma cacao
Thecc1EG040747 2.0kb upstream 2.0kb upstream 3331 true scaffold_9: 33091939-33095269 Theobroma cacao
Thecc1EG040747 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33093270-33095269 Theobroma cacao
Thecc1EG040747 2.0kb downstream 2.0kb downstream 3331 true scaffold_9: 33089939-33093269 Theobroma cacao
Thecc1EG040747 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33089939-33091938 Theobroma cacao
Thecc1EG040747 5.0kb upstream 5.0kb upstream 6331 true scaffold_9: 33091939-33098269 Theobroma cacao
Thecc1EG040747 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33093270-33098269 Theobroma cacao
Thecc1EG040747 5.0kb downstream 5.0kb downstream 6331 true scaffold_9: 33086939-33093269 Theobroma cacao
Thecc1EG040747 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33086939-33091938 Theobroma cacao
Thecc1EG040747 10.0kb upstream 10.0kb upstream 11331 true scaffold_9: 33091939-33103269 Theobroma cacao
Thecc1EG040747 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33093270-33103269 Theobroma cacao
Thecc1EG040747 10.0kb downstream 10.0kb downstream 11331 true scaffold_9: 33081939-33093269 Theobroma cacao
Thecc1EG040747 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33081939-33091938 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842179 5264 Brassicales-Malvales View MSA
124351935 5266 SBM View MSA
124251096 5268 Malvidae View MSA
124070158 5270 Rosid View MSA
123749213 5271 Pentapetalae View MSA
122793908 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain