Gene : Thecc1EG040717 T. cacao v1.1
Defline:  (1 of 1) PTHR24349:SF116 - CALCIUM-DEPENDENT PROTEIN KINASE 7 Genomic Order:  2315
Name:  ? Thecc1EG040717 Secondary Identifier:  ? PAC:27430665
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040717 0.5kb upstream 0.5kb upstream 9443 true scaffold_9: 32853112-32862554 Theobroma cacao
Thecc1EG040717 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 32853112-32853611 Theobroma cacao
Thecc1EG040717 0.5kb downstream 0.5kb downstream 9443 true scaffold_9: 32853612-32863054 Theobroma cacao
Thecc1EG040717 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 32862555-32863054 Theobroma cacao
Thecc1EG040717 1.0kb upstream 1.0kb upstream 9943 true scaffold_9: 32852612-32862554 Theobroma cacao
Thecc1EG040717 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 32852612-32853611 Theobroma cacao
Thecc1EG040717 1.0kb downstream 1.0kb downstream 9943 true scaffold_9: 32853612-32863554 Theobroma cacao
Thecc1EG040717 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 32862555-32863554 Theobroma cacao
Thecc1EG040717 2.0kb upstream 2.0kb upstream 10943 true scaffold_9: 32851612-32862554 Theobroma cacao
Thecc1EG040717 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 32851612-32853611 Theobroma cacao
Thecc1EG040717 2.0kb downstream 2.0kb downstream 10943 true scaffold_9: 32853612-32864554 Theobroma cacao
Thecc1EG040717 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 32862555-32864554 Theobroma cacao
Thecc1EG040717 5.0kb upstream 5.0kb upstream 13943 true scaffold_9: 32848612-32862554 Theobroma cacao
Thecc1EG040717 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 32848612-32853611 Theobroma cacao
Thecc1EG040717 5.0kb downstream 5.0kb downstream 13943 true scaffold_9: 32853612-32867554 Theobroma cacao
Thecc1EG040717 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 32862555-32867554 Theobroma cacao
Thecc1EG040717 10.0kb upstream 10.0kb upstream 18943 true scaffold_9: 32843612-32862554 Theobroma cacao
Thecc1EG040717 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 32843612-32853611 Theobroma cacao
Thecc1EG040717 10.0kb downstream 10.0kb downstream 18943 true scaffold_9: 32853612-32872554 Theobroma cacao
Thecc1EG040717 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 32862555-32872554 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836793 5264 Brassicales-Malvales View MSA
124342314 5266 SBM View MSA
124244480 5268 Malvidae View MSA
124061660 5270 Rosid View MSA
123751372 5271 Pentapetalae View MSA
122791900 5272 Eudicot View MSA
122045931 5273 Angiosperm View MSA
121348324 5274 Embryophyte View MSA
123380819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain