Gene : Thecc1EG040698 T. cacao v1.1
Defline:  (1 of 2) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  2301
Name:  ? Thecc1EG040698 Secondary Identifier:  ? PAC:27430834
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040698 0.5kb upstream 0.5kb upstream 6789 true scaffold_9: 32721699-32728487 Theobroma cacao
Thecc1EG040698 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 32721699-32722198 Theobroma cacao
Thecc1EG040698 0.5kb downstream 0.5kb downstream 6789 true scaffold_9: 32722199-32728987 Theobroma cacao
Thecc1EG040698 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 32728488-32728987 Theobroma cacao
Thecc1EG040698 1.0kb upstream 1.0kb upstream 7289 true scaffold_9: 32721199-32728487 Theobroma cacao
Thecc1EG040698 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 32721199-32722198 Theobroma cacao
Thecc1EG040698 1.0kb downstream 1.0kb downstream 7289 true scaffold_9: 32722199-32729487 Theobroma cacao
Thecc1EG040698 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 32728488-32729487 Theobroma cacao
Thecc1EG040698 2.0kb upstream 2.0kb upstream 8289 true scaffold_9: 32720199-32728487 Theobroma cacao
Thecc1EG040698 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 32720199-32722198 Theobroma cacao
Thecc1EG040698 2.0kb downstream 2.0kb downstream 8289 true scaffold_9: 32722199-32730487 Theobroma cacao
Thecc1EG040698 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 32728488-32730487 Theobroma cacao
Thecc1EG040698 5.0kb upstream 5.0kb upstream 11289 true scaffold_9: 32717199-32728487 Theobroma cacao
Thecc1EG040698 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 32717199-32722198 Theobroma cacao
Thecc1EG040698 5.0kb downstream 5.0kb downstream 11289 true scaffold_9: 32722199-32733487 Theobroma cacao
Thecc1EG040698 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 32728488-32733487 Theobroma cacao
Thecc1EG040698 10.0kb upstream 10.0kb upstream 16289 true scaffold_9: 32712199-32728487 Theobroma cacao
Thecc1EG040698 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 32712199-32722198 Theobroma cacao
Thecc1EG040698 10.0kb downstream 10.0kb downstream 16289 true scaffold_9: 32722199-32738487 Theobroma cacao
Thecc1EG040698 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 32728488-32738487 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832811 5264 Brassicales-Malvales View MSA
124341338 5266 SBM View MSA
124248353 5268 Malvidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain