Gene : Thecc1EG040699 T. cacao v1.1
Defline:  (1 of 2) PTHR13935:SF41 - ACHAETE-SCUTE HOMOLOG 3 Genomic Order:  2302
Name:  ? Thecc1EG040699 Secondary Identifier:  ? PAC:27427966
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040699 0.5kb upstream 0.5kb upstream 1941 true scaffold_9: 32736679-32738619 Theobroma cacao
Thecc1EG040699 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 32736679-32737178 Theobroma cacao
Thecc1EG040699 0.5kb downstream 0.5kb downstream 1941 true scaffold_9: 32737179-32739119 Theobroma cacao
Thecc1EG040699 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 32738620-32739119 Theobroma cacao
Thecc1EG040699 1.0kb upstream 1.0kb upstream 2441 true scaffold_9: 32736179-32738619 Theobroma cacao
Thecc1EG040699 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 32736179-32737178 Theobroma cacao
Thecc1EG040699 1.0kb downstream 1.0kb downstream 2441 true scaffold_9: 32737179-32739619 Theobroma cacao
Thecc1EG040699 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 32738620-32739619 Theobroma cacao
Thecc1EG040699 2.0kb upstream 2.0kb upstream 3441 true scaffold_9: 32735179-32738619 Theobroma cacao
Thecc1EG040699 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 32735179-32737178 Theobroma cacao
Thecc1EG040699 2.0kb downstream 2.0kb downstream 3441 true scaffold_9: 32737179-32740619 Theobroma cacao
Thecc1EG040699 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 32738620-32740619 Theobroma cacao
Thecc1EG040699 5.0kb upstream 5.0kb upstream 6441 true scaffold_9: 32732179-32738619 Theobroma cacao
Thecc1EG040699 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 32732179-32737178 Theobroma cacao
Thecc1EG040699 5.0kb downstream 5.0kb downstream 6441 true scaffold_9: 32737179-32743619 Theobroma cacao
Thecc1EG040699 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 32738620-32743619 Theobroma cacao
Thecc1EG040699 10.0kb upstream 10.0kb upstream 11441 true scaffold_9: 32727179-32738619 Theobroma cacao
Thecc1EG040699 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 32727179-32737178 Theobroma cacao
Thecc1EG040699 10.0kb downstream 10.0kb downstream 11441 true scaffold_9: 32737179-32748619 Theobroma cacao
Thecc1EG040699 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 32738620-32748619 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836801 5264 Brassicales-Malvales View MSA
124322205 5266 SBM View MSA
124254233 5268 Malvidae View MSA
124071325 5270 Rosid View MSA
123751421 5271 Pentapetalae View MSA
122790904 5272 Eudicot View MSA
122049440 5273 Angiosperm View MSA
121311403 5274 Embryophyte View MSA
123348704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain