Gene : Thecc1EG040658 T. cacao v1.1
Defline:  (1 of 1) K00106 - xanthine dehydrogenase/oxidase (XDH) Genomic Order:  2282
Name:  ? Thecc1EG040658 Secondary Identifier:  ? PAC:27430958
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5695 Theobroma cacao pathologic  
Tcacao PWY-6596 Theobroma cacao pathologic  
Tcacao PWY-6606 Theobroma cacao pathologic  
Tcacao PWY-6608 Theobroma cacao pathologic  
Tcacao SALVADEHYPOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040658 0.5kb upstream 0.5kb upstream 16625 true scaffold_9: 32352781-32369405 Theobroma cacao
Thecc1EG040658 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 32368906-32369405 Theobroma cacao
Thecc1EG040658 0.5kb downstream 0.5kb downstream 16625 true scaffold_9: 32352281-32368905 Theobroma cacao
Thecc1EG040658 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 32352281-32352780 Theobroma cacao
Thecc1EG040658 1.0kb upstream 1.0kb upstream 17125 true scaffold_9: 32352781-32369905 Theobroma cacao
Thecc1EG040658 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 32368906-32369905 Theobroma cacao
Thecc1EG040658 1.0kb downstream 1.0kb downstream 17125 true scaffold_9: 32351781-32368905 Theobroma cacao
Thecc1EG040658 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 32351781-32352780 Theobroma cacao
Thecc1EG040658 2.0kb upstream 2.0kb upstream 18125 true scaffold_9: 32352781-32370905 Theobroma cacao
Thecc1EG040658 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 32368906-32370905 Theobroma cacao
Thecc1EG040658 2.0kb downstream 2.0kb downstream 18125 true scaffold_9: 32350781-32368905 Theobroma cacao
Thecc1EG040658 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 32350781-32352780 Theobroma cacao
Thecc1EG040658 5.0kb upstream 5.0kb upstream 21125 true scaffold_9: 32352781-32373905 Theobroma cacao
Thecc1EG040658 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 32368906-32373905 Theobroma cacao
Thecc1EG040658 5.0kb downstream 5.0kb downstream 21125 true scaffold_9: 32347781-32368905 Theobroma cacao
Thecc1EG040658 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 32347781-32352780 Theobroma cacao
Thecc1EG040658 10.0kb upstream 10.0kb upstream 26125 true scaffold_9: 32352781-32378905 Theobroma cacao
Thecc1EG040658 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 32368906-32378905 Theobroma cacao
Thecc1EG040658 10.0kb downstream 10.0kb downstream 26125 true scaffold_9: 32342781-32368905 Theobroma cacao
Thecc1EG040658 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 32342781-32352780 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840481 5264 Brassicales-Malvales View MSA
124343670 5266 SBM View MSA
124237947 5268 Malvidae View MSA
124061487 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain