Gene : Thecc1EG041038 T. cacao v1.1
Defline:  (1 of 8) PTHR10353//PTHR10353:SF29 - GLYCOSYL HYDROLASE // BETA-GLUCOSIDASE 1-RELATED Genomic Order:  2525
Name:  ? Thecc1EG041038 Secondary Identifier:  ? PAC:27430013
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5176 Theobroma cacao pathologic  
Tcacao PWY-7089 Theobroma cacao pathologic  
Tcacao PWY-7091 Theobroma cacao pathologic  
Tcacao PWY-7092 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041038 0.5kb upstream 0.5kb upstream 3465 true scaffold_9: 35019515-35022979 Theobroma cacao
Thecc1EG041038 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35019515-35020014 Theobroma cacao
Thecc1EG041038 0.5kb downstream 0.5kb downstream 3465 true scaffold_9: 35020015-35023479 Theobroma cacao
Thecc1EG041038 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35022980-35023479 Theobroma cacao
Thecc1EG041038 1.0kb upstream 1.0kb upstream 3965 true scaffold_9: 35019015-35022979 Theobroma cacao
Thecc1EG041038 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35019015-35020014 Theobroma cacao
Thecc1EG041038 1.0kb downstream 1.0kb downstream 3965 true scaffold_9: 35020015-35023979 Theobroma cacao
Thecc1EG041038 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35022980-35023979 Theobroma cacao
Thecc1EG041038 2.0kb upstream 2.0kb upstream 4965 true scaffold_9: 35018015-35022979 Theobroma cacao
Thecc1EG041038 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35018015-35020014 Theobroma cacao
Thecc1EG041038 2.0kb downstream 2.0kb downstream 4965 true scaffold_9: 35020015-35024979 Theobroma cacao
Thecc1EG041038 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35022980-35024979 Theobroma cacao
Thecc1EG041038 5.0kb upstream 5.0kb upstream 7965 true scaffold_9: 35015015-35022979 Theobroma cacao
Thecc1EG041038 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35015015-35020014 Theobroma cacao
Thecc1EG041038 5.0kb downstream 5.0kb downstream 7965 true scaffold_9: 35020015-35027979 Theobroma cacao
Thecc1EG041038 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35022980-35027979 Theobroma cacao
Thecc1EG041038 10.0kb upstream 10.0kb upstream 12965 true scaffold_9: 35010015-35022979 Theobroma cacao
Thecc1EG041038 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35010015-35020014 Theobroma cacao
Thecc1EG041038 10.0kb downstream 10.0kb downstream 12965 true scaffold_9: 35020015-35032979 Theobroma cacao
Thecc1EG041038 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35022980-35032979 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841106 5264 Brassicales-Malvales View MSA
124322843 5266 SBM View MSA
124252505 5268 Malvidae View MSA
124074586 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain