Gene : Thecc1EG040966 T. cacao v1.1
Defline:  (1 of 1) 2.8.1.7//4.4.1.16 - Cysteine desulfurase / Cysteine desulfurylase // Selenocysteine lyase / Selenocysteine reductase Genomic Order:  2480
Name:  ? Thecc1EG040966 Secondary Identifier:  ? PAC:27425892
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1021 Theobroma cacao pathologic  
Tcacao PWY-6823 Theobroma cacao pathologic  
Tcacao PWY-7250 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040966 0.5kb upstream 0.5kb upstream 5867 true scaffold_9: 34621458-34627324 Theobroma cacao
Thecc1EG040966 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34621458-34621957 Theobroma cacao
Thecc1EG040966 0.5kb downstream 0.5kb downstream 5867 true scaffold_9: 34621958-34627824 Theobroma cacao
Thecc1EG040966 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34627325-34627824 Theobroma cacao
Thecc1EG040966 1.0kb upstream 1.0kb upstream 6367 true scaffold_9: 34620958-34627324 Theobroma cacao
Thecc1EG040966 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34620958-34621957 Theobroma cacao
Thecc1EG040966 1.0kb downstream 1.0kb downstream 6367 true scaffold_9: 34621958-34628324 Theobroma cacao
Thecc1EG040966 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34627325-34628324 Theobroma cacao
Thecc1EG040966 2.0kb upstream 2.0kb upstream 7367 true scaffold_9: 34619958-34627324 Theobroma cacao
Thecc1EG040966 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34619958-34621957 Theobroma cacao
Thecc1EG040966 2.0kb downstream 2.0kb downstream 7367 true scaffold_9: 34621958-34629324 Theobroma cacao
Thecc1EG040966 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34627325-34629324 Theobroma cacao
Thecc1EG040966 5.0kb upstream 5.0kb upstream 10367 true scaffold_9: 34616958-34627324 Theobroma cacao
Thecc1EG040966 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34616958-34621957 Theobroma cacao
Thecc1EG040966 5.0kb downstream 5.0kb downstream 10367 true scaffold_9: 34621958-34632324 Theobroma cacao
Thecc1EG040966 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34627325-34632324 Theobroma cacao
Thecc1EG040966 10.0kb upstream 10.0kb upstream 15367 true scaffold_9: 34611958-34627324 Theobroma cacao
Thecc1EG040966 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34611958-34621957 Theobroma cacao
Thecc1EG040966 10.0kb downstream 10.0kb downstream 15367 true scaffold_9: 34621958-34637324 Theobroma cacao
Thecc1EG040966 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34627325-34637324 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832892 5264 Brassicales-Malvales View MSA
124346335 5266 SBM View MSA
124238187 5268 Malvidae View MSA
124062122 5270 Rosid View MSA
123738873 5271 Pentapetalae View MSA
122791237 5272 Eudicot View MSA
122045699 5273 Angiosperm View MSA
121346585 5274 Embryophyte View MSA
123424860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain