Gene : Thecc1EG040956 T. cacao v1.1
Defline:  (1 of 2) PTHR26374:SF191 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN Genomic Order:  2471
Name:  ? Thecc1EG040956 Secondary Identifier:  ? PAC:27427454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040956 0.5kb upstream 0.5kb upstream 2655 true scaffold_9: 34570449-34573103 Theobroma cacao
Thecc1EG040956 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34570449-34570948 Theobroma cacao
Thecc1EG040956 0.5kb downstream 0.5kb downstream 2655 true scaffold_9: 34570949-34573603 Theobroma cacao
Thecc1EG040956 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34573104-34573603 Theobroma cacao
Thecc1EG040956 1.0kb upstream 1.0kb upstream 3155 true scaffold_9: 34569949-34573103 Theobroma cacao
Thecc1EG040956 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34569949-34570948 Theobroma cacao
Thecc1EG040956 1.0kb downstream 1.0kb downstream 3155 true scaffold_9: 34570949-34574103 Theobroma cacao
Thecc1EG040956 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34573104-34574103 Theobroma cacao
Thecc1EG040956 2.0kb upstream 2.0kb upstream 4155 true scaffold_9: 34568949-34573103 Theobroma cacao
Thecc1EG040956 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34568949-34570948 Theobroma cacao
Thecc1EG040956 2.0kb downstream 2.0kb downstream 4155 true scaffold_9: 34570949-34575103 Theobroma cacao
Thecc1EG040956 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34573104-34575103 Theobroma cacao
Thecc1EG040956 5.0kb upstream 5.0kb upstream 7155 true scaffold_9: 34565949-34573103 Theobroma cacao
Thecc1EG040956 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34565949-34570948 Theobroma cacao
Thecc1EG040956 5.0kb downstream 5.0kb downstream 7155 true scaffold_9: 34570949-34578103 Theobroma cacao
Thecc1EG040956 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34573104-34578103 Theobroma cacao
Thecc1EG040956 10.0kb upstream 10.0kb upstream 12155 true scaffold_9: 34560949-34573103 Theobroma cacao
Thecc1EG040956 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34560949-34570948 Theobroma cacao
Thecc1EG040956 10.0kb downstream 10.0kb downstream 12155 true scaffold_9: 34570949-34583103 Theobroma cacao
Thecc1EG040956 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34573104-34583103 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823163 5264 Brassicales-Malvales Singleton cluster - no MSA
124319261 5266 SBM Singleton cluster - no MSA
124248505 5268 Malvidae View MSA
124070419 5270 Rosid View MSA
123743866 5271 Pentapetalae View MSA
122796757 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain