Gene : Thecc1EG040944 T. cacao v1.1
Defline:  (1 of 1) K09595 - minor histocompatibility antigen H13 [EC:3.4.23.-] (HM13) Genomic Order:  2464
Name:  ? Thecc1EG040944 Secondary Identifier:  ? PAC:27428946
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040944 0.5kb upstream 0.5kb upstream 7435 true scaffold_9: 34487941-34495375 Theobroma cacao
Thecc1EG040944 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34487941-34488440 Theobroma cacao
Thecc1EG040944 0.5kb downstream 0.5kb downstream 7435 true scaffold_9: 34488441-34495875 Theobroma cacao
Thecc1EG040944 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34495376-34495875 Theobroma cacao
Thecc1EG040944 1.0kb upstream 1.0kb upstream 7935 true scaffold_9: 34487441-34495375 Theobroma cacao
Thecc1EG040944 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34487441-34488440 Theobroma cacao
Thecc1EG040944 1.0kb downstream 1.0kb downstream 7935 true scaffold_9: 34488441-34496375 Theobroma cacao
Thecc1EG040944 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34495376-34496375 Theobroma cacao
Thecc1EG040944 2.0kb upstream 2.0kb upstream 8935 true scaffold_9: 34486441-34495375 Theobroma cacao
Thecc1EG040944 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34486441-34488440 Theobroma cacao
Thecc1EG040944 2.0kb downstream 2.0kb downstream 8935 true scaffold_9: 34488441-34497375 Theobroma cacao
Thecc1EG040944 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34495376-34497375 Theobroma cacao
Thecc1EG040944 5.0kb upstream 5.0kb upstream 11935 true scaffold_9: 34483441-34495375 Theobroma cacao
Thecc1EG040944 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34483441-34488440 Theobroma cacao
Thecc1EG040944 5.0kb downstream 5.0kb downstream 11935 true scaffold_9: 34488441-34500375 Theobroma cacao
Thecc1EG040944 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34495376-34500375 Theobroma cacao
Thecc1EG040944 10.0kb upstream 10.0kb upstream 16935 true scaffold_9: 34478441-34495375 Theobroma cacao
Thecc1EG040944 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34478441-34488440 Theobroma cacao
Thecc1EG040944 10.0kb downstream 10.0kb downstream 16935 true scaffold_9: 34488441-34505375 Theobroma cacao
Thecc1EG040944 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34495376-34505375 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840626 5264 Brassicales-Malvales View MSA
124345912 5266 SBM View MSA
124251222 5268 Malvidae View MSA
124062254 5270 Rosid View MSA
123736770 5271 Pentapetalae View MSA
122793360 5272 Eudicot View MSA
122042427 5273 Angiosperm View MSA
121351308 5274 Embryophyte View MSA
123428175 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain