Gene : Thecc1EG040941 T. cacao v1.1
Defline:  (1 of 2) PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 Genomic Order:  2461
Name:  ? Thecc1EG040941 Secondary Identifier:  ? PAC:27428701
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040941 0.5kb upstream 0.5kb upstream 4824 true scaffold_9: 34454283-34459106 Theobroma cacao
Thecc1EG040941 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34458607-34459106 Theobroma cacao
Thecc1EG040941 0.5kb downstream 0.5kb downstream 4824 true scaffold_9: 34453783-34458606 Theobroma cacao
Thecc1EG040941 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34453783-34454282 Theobroma cacao
Thecc1EG040941 1.0kb upstream 1.0kb upstream 5324 true scaffold_9: 34454283-34459606 Theobroma cacao
Thecc1EG040941 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34458607-34459606 Theobroma cacao
Thecc1EG040941 1.0kb downstream 1.0kb downstream 5324 true scaffold_9: 34453283-34458606 Theobroma cacao
Thecc1EG040941 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34453283-34454282 Theobroma cacao
Thecc1EG040941 2.0kb upstream 2.0kb upstream 6324 true scaffold_9: 34454283-34460606 Theobroma cacao
Thecc1EG040941 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34458607-34460606 Theobroma cacao
Thecc1EG040941 2.0kb downstream 2.0kb downstream 6324 true scaffold_9: 34452283-34458606 Theobroma cacao
Thecc1EG040941 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34452283-34454282 Theobroma cacao
Thecc1EG040941 5.0kb upstream 5.0kb upstream 9324 true scaffold_9: 34454283-34463606 Theobroma cacao
Thecc1EG040941 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34458607-34463606 Theobroma cacao
Thecc1EG040941 5.0kb downstream 5.0kb downstream 9324 true scaffold_9: 34449283-34458606 Theobroma cacao
Thecc1EG040941 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34449283-34454282 Theobroma cacao
Thecc1EG040941 10.0kb upstream 10.0kb upstream 14324 true scaffold_9: 34454283-34468606 Theobroma cacao
Thecc1EG040941 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34458607-34468606 Theobroma cacao
Thecc1EG040941 10.0kb downstream 10.0kb downstream 14324 true scaffold_9: 34444283-34458606 Theobroma cacao
Thecc1EG040941 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34444283-34454282 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839108 5264 Brassicales-Malvales View MSA
124351134 5266 SBM View MSA
124248636 5268 Malvidae View MSA
124069167 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain