Gene : Thecc1EG041172 T. cacao v1.1

Defline:  (1 of 3) K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Genomic Order:  2629
Name:  ? Thecc1EG041172 Secondary Identifier:  ? PAC:27428571

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041172 0.5kb upstream 0.5kb upstream 18639 true scaffold_9: 35946490-35965128 Theobroma cacao
Thecc1EG041172 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35946490-35946989 Theobroma cacao
Thecc1EG041172 0.5kb downstream 0.5kb downstream 18639 true scaffold_9: 35946990-35965628 Theobroma cacao
Thecc1EG041172 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35965129-35965628 Theobroma cacao
Thecc1EG041172 1.0kb upstream 1.0kb upstream 19139 true scaffold_9: 35945990-35965128 Theobroma cacao
Thecc1EG041172 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35945990-35946989 Theobroma cacao
Thecc1EG041172 1.0kb downstream 1.0kb downstream 19139 true scaffold_9: 35946990-35966128 Theobroma cacao
Thecc1EG041172 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35965129-35966128 Theobroma cacao
Thecc1EG041172 2.0kb upstream 2.0kb upstream 20139 true scaffold_9: 35944990-35965128 Theobroma cacao
Thecc1EG041172 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35944990-35946989 Theobroma cacao
Thecc1EG041172 2.0kb downstream 2.0kb downstream 20139 true scaffold_9: 35946990-35967128 Theobroma cacao
Thecc1EG041172 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35965129-35967128 Theobroma cacao
Thecc1EG041172 5.0kb upstream 5.0kb upstream 23139 true scaffold_9: 35941990-35965128 Theobroma cacao
Thecc1EG041172 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35941990-35946989 Theobroma cacao
Thecc1EG041172 5.0kb downstream 5.0kb downstream 23139 true scaffold_9: 35946990-35970128 Theobroma cacao
Thecc1EG041172 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35965129-35970128 Theobroma cacao
Thecc1EG041172 10.0kb upstream 10.0kb upstream 28139 true scaffold_9: 35936990-35965128 Theobroma cacao
Thecc1EG041172 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35936990-35946989 Theobroma cacao
Thecc1EG041172 10.0kb downstream 10.0kb downstream 28139 true scaffold_9: 35946990-35975128 Theobroma cacao
Thecc1EG041172 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35965129-35975128 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825779 5264 Brassicales-Malvales View MSA
124347908 5266 SBM View MSA
124248517 5268 Malvidae View MSA
124072091 5270 Rosid View MSA
123746914 5271 Pentapetalae View MSA
122788764 5272 Eudicot View MSA
122042201 5273 Angiosperm View MSA
121346231 5274 Embryophyte View MSA
123427549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain