Gene : Thecc1EG041085 T. cacao v1.1
Defline:  (1 of 1) PTHR31189//PTHR31189:SF2 - FAMILY NOT NAMED // CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  2560
Name:  ? Thecc1EG041085 Secondary Identifier:  ? PAC:27429721
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041085 0.5kb upstream 0.5kb upstream 3545 true scaffold_9: 35389009-35392553 Theobroma cacao
Thecc1EG041085 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35392054-35392553 Theobroma cacao
Thecc1EG041085 0.5kb downstream 0.5kb downstream 3545 true scaffold_9: 35388509-35392053 Theobroma cacao
Thecc1EG041085 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35388509-35389008 Theobroma cacao
Thecc1EG041085 1.0kb upstream 1.0kb upstream 4045 true scaffold_9: 35389009-35393053 Theobroma cacao
Thecc1EG041085 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35392054-35393053 Theobroma cacao
Thecc1EG041085 1.0kb downstream 1.0kb downstream 4045 true scaffold_9: 35388009-35392053 Theobroma cacao
Thecc1EG041085 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35388009-35389008 Theobroma cacao
Thecc1EG041085 2.0kb upstream 2.0kb upstream 5045 true scaffold_9: 35389009-35394053 Theobroma cacao
Thecc1EG041085 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35392054-35394053 Theobroma cacao
Thecc1EG041085 2.0kb downstream 2.0kb downstream 5045 true scaffold_9: 35387009-35392053 Theobroma cacao
Thecc1EG041085 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35387009-35389008 Theobroma cacao
Thecc1EG041085 5.0kb upstream 5.0kb upstream 8045 true scaffold_9: 35389009-35397053 Theobroma cacao
Thecc1EG041085 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35392054-35397053 Theobroma cacao
Thecc1EG041085 5.0kb downstream 5.0kb downstream 8045 true scaffold_9: 35384009-35392053 Theobroma cacao
Thecc1EG041085 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35384009-35389008 Theobroma cacao
Thecc1EG041085 10.0kb upstream 10.0kb upstream 13045 true scaffold_9: 35389009-35402053 Theobroma cacao
Thecc1EG041085 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35392054-35402053 Theobroma cacao
Thecc1EG041085 10.0kb downstream 10.0kb downstream 13045 true scaffold_9: 35379009-35392053 Theobroma cacao
Thecc1EG041085 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35379009-35389008 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832835 5264 Brassicales-Malvales View MSA
124342856 5266 SBM View MSA
124239817 5268 Malvidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain