Gene : Thecc1EG041359 T. cacao v1.1
Defline:  (1 of 2) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  2746
Name:  ? Thecc1EG041359 Secondary Identifier:  ? PAC:27430706
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041359 0.5kb upstream 0.5kb upstream 1580 true scaffold_9: 37236661-37238240 Theobroma cacao
Thecc1EG041359 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 37237741-37238240 Theobroma cacao
Thecc1EG041359 0.5kb downstream 0.5kb downstream 1580 true scaffold_9: 37236161-37237740 Theobroma cacao
Thecc1EG041359 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 37236161-37236660 Theobroma cacao
Thecc1EG041359 1.0kb upstream 1.0kb upstream 2080 true scaffold_9: 37236661-37238740 Theobroma cacao
Thecc1EG041359 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 37237741-37238740 Theobroma cacao
Thecc1EG041359 1.0kb downstream 1.0kb downstream 2080 true scaffold_9: 37235661-37237740 Theobroma cacao
Thecc1EG041359 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 37235661-37236660 Theobroma cacao
Thecc1EG041359 2.0kb upstream 2.0kb upstream 3080 true scaffold_9: 37236661-37239740 Theobroma cacao
Thecc1EG041359 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 37237741-37239740 Theobroma cacao
Thecc1EG041359 2.0kb downstream 2.0kb downstream 3080 true scaffold_9: 37234661-37237740 Theobroma cacao
Thecc1EG041359 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 37234661-37236660 Theobroma cacao
Thecc1EG041359 5.0kb upstream 5.0kb upstream 6080 true scaffold_9: 37236661-37242740 Theobroma cacao
Thecc1EG041359 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 37237741-37242740 Theobroma cacao
Thecc1EG041359 5.0kb downstream 5.0kb downstream 6080 true scaffold_9: 37231661-37237740 Theobroma cacao
Thecc1EG041359 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 37231661-37236660 Theobroma cacao
Thecc1EG041359 10.0kb upstream 10.0kb upstream 11080 true scaffold_9: 37236661-37247740 Theobroma cacao
Thecc1EG041359 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 37237741-37247740 Theobroma cacao
Thecc1EG041359 10.0kb downstream 10.0kb downstream 11080 true scaffold_9: 37226661-37237740 Theobroma cacao
Thecc1EG041359 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 37226661-37236660 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837381 5264 Brassicales-Malvales View MSA
124343898 5266 SBM View MSA
124240358 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain