Gene : Thecc1EG041370 T. cacao v1.1

Defline:  (1 of 1) PTHR33083//PTHR33083:SF5 - FAMILY NOT NAMED // POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  2754
Name:  ? Thecc1EG041370 Secondary Identifier:  ? PAC:27427867

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041370 0.5kb upstream 0.5kb upstream 6776 true scaffold_9: 37288767-37295542 Theobroma cacao
Thecc1EG041370 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 37295043-37295542 Theobroma cacao
Thecc1EG041370 0.5kb downstream 0.5kb downstream 6776 true scaffold_9: 37288267-37295042 Theobroma cacao
Thecc1EG041370 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 37288267-37288766 Theobroma cacao
Thecc1EG041370 1.0kb upstream 1.0kb upstream 7276 true scaffold_9: 37288767-37296042 Theobroma cacao
Thecc1EG041370 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 37295043-37296042 Theobroma cacao
Thecc1EG041370 1.0kb downstream 1.0kb downstream 7276 true scaffold_9: 37287767-37295042 Theobroma cacao
Thecc1EG041370 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 37287767-37288766 Theobroma cacao
Thecc1EG041370 2.0kb upstream 2.0kb upstream 8276 true scaffold_9: 37288767-37297042 Theobroma cacao
Thecc1EG041370 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 37295043-37297042 Theobroma cacao
Thecc1EG041370 2.0kb downstream 2.0kb downstream 8276 true scaffold_9: 37286767-37295042 Theobroma cacao
Thecc1EG041370 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 37286767-37288766 Theobroma cacao
Thecc1EG041370 5.0kb upstream 5.0kb upstream 11276 true scaffold_9: 37288767-37300042 Theobroma cacao
Thecc1EG041370 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 37295043-37300042 Theobroma cacao
Thecc1EG041370 5.0kb downstream 5.0kb downstream 11276 true scaffold_9: 37283767-37295042 Theobroma cacao
Thecc1EG041370 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 37283767-37288766 Theobroma cacao
Thecc1EG041370 10.0kb upstream 10.0kb upstream 16276 true scaffold_9: 37288767-37305042 Theobroma cacao
Thecc1EG041370 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 37295043-37305042 Theobroma cacao
Thecc1EG041370 10.0kb downstream 10.0kb downstream 16276 true scaffold_9: 37278767-37295042 Theobroma cacao
Thecc1EG041370 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 37278767-37288766 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836097 5264 Brassicales-Malvales View MSA
124346132 5266 SBM View MSA
124241466 5268 Malvidae View MSA
124060830 5270 Rosid View MSA
123740315 5271 Pentapetalae View MSA
122789916 5272 Eudicot View MSA
122047516 5273 Angiosperm View MSA
121310750 5274 Embryophyte View MSA
123348161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain