Gene : Thecc1EG041188 T. cacao v1.1
Defline:  (1 of 2) PTHR33264//PTHR33264:SF5 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED Genomic Order:  2638
Name:  ? Thecc1EG041188 Secondary Identifier:  ? PAC:27426081
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041188 0.5kb upstream 0.5kb upstream 1512 true scaffold_9: 36044015-36045526 Theobroma cacao
Thecc1EG041188 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 36045027-36045526 Theobroma cacao
Thecc1EG041188 0.5kb downstream 0.5kb downstream 1512 true scaffold_9: 36043515-36045026 Theobroma cacao
Thecc1EG041188 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 36043515-36044014 Theobroma cacao
Thecc1EG041188 1.0kb upstream 1.0kb upstream 2012 true scaffold_9: 36044015-36046026 Theobroma cacao
Thecc1EG041188 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 36045027-36046026 Theobroma cacao
Thecc1EG041188 1.0kb downstream 1.0kb downstream 2012 true scaffold_9: 36043015-36045026 Theobroma cacao
Thecc1EG041188 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 36043015-36044014 Theobroma cacao
Thecc1EG041188 2.0kb upstream 2.0kb upstream 3012 true scaffold_9: 36044015-36047026 Theobroma cacao
Thecc1EG041188 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 36045027-36047026 Theobroma cacao
Thecc1EG041188 2.0kb downstream 2.0kb downstream 3012 true scaffold_9: 36042015-36045026 Theobroma cacao
Thecc1EG041188 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 36042015-36044014 Theobroma cacao
Thecc1EG041188 5.0kb upstream 5.0kb upstream 6012 true scaffold_9: 36044015-36050026 Theobroma cacao
Thecc1EG041188 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 36045027-36050026 Theobroma cacao
Thecc1EG041188 5.0kb downstream 5.0kb downstream 6012 true scaffold_9: 36039015-36045026 Theobroma cacao
Thecc1EG041188 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 36039015-36044014 Theobroma cacao
Thecc1EG041188 10.0kb upstream 10.0kb upstream 11012 true scaffold_9: 36044015-36055026 Theobroma cacao
Thecc1EG041188 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 36045027-36055026 Theobroma cacao
Thecc1EG041188 10.0kb downstream 10.0kb downstream 11012 true scaffold_9: 36034015-36045026 Theobroma cacao
Thecc1EG041188 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 36034015-36044014 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832459 5264 Brassicales-Malvales View MSA
124345353 5266 SBM View MSA
124247277 5268 Malvidae View MSA
124063253 5270 Rosid View MSA
123746370 5271 Pentapetalae View MSA
122792575 5272 Eudicot View MSA
122043918 5273 Angiosperm View MSA
121310210 5274 Embryophyte View MSA
123347762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain