Gene : Thecc1EG041529 T. cacao v1.1
Defline:  (1 of 1) K11824 - AP-2 complex subunit alpha (AP2A) Genomic Order:  2884
Name:  ? Thecc1EG041529 Secondary Identifier:  ? PAC:27429846
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041529 0.5kb upstream 0.5kb upstream 14913 true scaffold_9: 38202838-38217750 Theobroma cacao
Thecc1EG041529 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38217251-38217750 Theobroma cacao
Thecc1EG041529 0.5kb downstream 0.5kb downstream 14913 true scaffold_9: 38202338-38217250 Theobroma cacao
Thecc1EG041529 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38202338-38202837 Theobroma cacao
Thecc1EG041529 1.0kb upstream 1.0kb upstream 15413 true scaffold_9: 38202838-38218250 Theobroma cacao
Thecc1EG041529 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38217251-38218250 Theobroma cacao
Thecc1EG041529 1.0kb downstream 1.0kb downstream 15413 true scaffold_9: 38201838-38217250 Theobroma cacao
Thecc1EG041529 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38201838-38202837 Theobroma cacao
Thecc1EG041529 2.0kb upstream 2.0kb upstream 16413 true scaffold_9: 38202838-38219250 Theobroma cacao
Thecc1EG041529 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38217251-38219250 Theobroma cacao
Thecc1EG041529 2.0kb downstream 2.0kb downstream 16413 true scaffold_9: 38200838-38217250 Theobroma cacao
Thecc1EG041529 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38200838-38202837 Theobroma cacao
Thecc1EG041529 5.0kb upstream 5.0kb upstream 19413 true scaffold_9: 38202838-38222250 Theobroma cacao
Thecc1EG041529 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38217251-38222250 Theobroma cacao
Thecc1EG041529 5.0kb downstream 5.0kb downstream 19413 true scaffold_9: 38197838-38217250 Theobroma cacao
Thecc1EG041529 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38197838-38202837 Theobroma cacao
Thecc1EG041529 10.0kb upstream 10.0kb upstream 24413 true scaffold_9: 38202838-38227250 Theobroma cacao
Thecc1EG041529 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38217251-38227250 Theobroma cacao
Thecc1EG041529 10.0kb downstream 10.0kb downstream 24413 true scaffold_9: 38192838-38217250 Theobroma cacao
Thecc1EG041529 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38192838-38202837 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840576 5264 Brassicales-Malvales View MSA
124345352 5266 SBM View MSA
124240489 5268 Malvidae View MSA
124063183 5270 Rosid View MSA
123736751 5271 Pentapetalae View MSA
122792631 5272 Eudicot View MSA
122046006 5273 Angiosperm View MSA
121350469 5274 Embryophyte View MSA
123424291 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain