Gene : Thecc1EG041525 T. cacao v1.1
Defline:  (1 of 1) PTHR28052//PTHR28052:SF1 - FAMILY NOT NAMED // UPF0545 PROTEIN C22ORF39 Genomic Order:  2880
Name:  ? Thecc1EG041525 Secondary Identifier:  ? PAC:27428699
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041525 0.5kb upstream 0.5kb upstream 2716 true scaffold_9: 38170816-38173531 Theobroma cacao
Thecc1EG041525 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38173032-38173531 Theobroma cacao
Thecc1EG041525 0.5kb downstream 0.5kb downstream 2716 true scaffold_9: 38170316-38173031 Theobroma cacao
Thecc1EG041525 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38170316-38170815 Theobroma cacao
Thecc1EG041525 1.0kb upstream 1.0kb upstream 3216 true scaffold_9: 38170816-38174031 Theobroma cacao
Thecc1EG041525 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38173032-38174031 Theobroma cacao
Thecc1EG041525 1.0kb downstream 1.0kb downstream 3216 true scaffold_9: 38169816-38173031 Theobroma cacao
Thecc1EG041525 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38169816-38170815 Theobroma cacao
Thecc1EG041525 2.0kb upstream 2.0kb upstream 4216 true scaffold_9: 38170816-38175031 Theobroma cacao
Thecc1EG041525 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38173032-38175031 Theobroma cacao
Thecc1EG041525 2.0kb downstream 2.0kb downstream 4216 true scaffold_9: 38168816-38173031 Theobroma cacao
Thecc1EG041525 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38168816-38170815 Theobroma cacao
Thecc1EG041525 5.0kb upstream 5.0kb upstream 7216 true scaffold_9: 38170816-38178031 Theobroma cacao
Thecc1EG041525 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38173032-38178031 Theobroma cacao
Thecc1EG041525 5.0kb downstream 5.0kb downstream 7216 true scaffold_9: 38165816-38173031 Theobroma cacao
Thecc1EG041525 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38165816-38170815 Theobroma cacao
Thecc1EG041525 10.0kb upstream 10.0kb upstream 12216 true scaffold_9: 38170816-38183031 Theobroma cacao
Thecc1EG041525 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38173032-38183031 Theobroma cacao
Thecc1EG041525 10.0kb downstream 10.0kb downstream 12216 true scaffold_9: 38160816-38173031 Theobroma cacao
Thecc1EG041525 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38160816-38170815 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841530 5264 Brassicales-Malvales View MSA
124339355 5266 SBM View MSA
124251672 5268 Malvidae View MSA
124067499 5270 Rosid View MSA
123746136 5271 Pentapetalae View MSA
122790093 5272 Eudicot View MSA
122047882 5273 Angiosperm View MSA
121343967 5274 Embryophyte View MSA
123425812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain