Gene : Thecc1EG041496 T. cacao v1.1
Defline:  (1 of 5) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  2856
Name:  ? Thecc1EG041496 Secondary Identifier:  ? PAC:27427703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041496 0.5kb upstream 0.5kb upstream 2009 true scaffold_9: 37997373-37999381 Theobroma cacao
Thecc1EG041496 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 37997373-37997872 Theobroma cacao
Thecc1EG041496 0.5kb downstream 0.5kb downstream 2009 true scaffold_9: 37997873-37999881 Theobroma cacao
Thecc1EG041496 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 37999382-37999881 Theobroma cacao
Thecc1EG041496 1.0kb upstream 1.0kb upstream 2509 true scaffold_9: 37996873-37999381 Theobroma cacao
Thecc1EG041496 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 37996873-37997872 Theobroma cacao
Thecc1EG041496 1.0kb downstream 1.0kb downstream 2509 true scaffold_9: 37997873-38000381 Theobroma cacao
Thecc1EG041496 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 37999382-38000381 Theobroma cacao
Thecc1EG041496 2.0kb upstream 2.0kb upstream 3509 true scaffold_9: 37995873-37999381 Theobroma cacao
Thecc1EG041496 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 37995873-37997872 Theobroma cacao
Thecc1EG041496 2.0kb downstream 2.0kb downstream 3509 true scaffold_9: 37997873-38001381 Theobroma cacao
Thecc1EG041496 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 37999382-38001381 Theobroma cacao
Thecc1EG041496 5.0kb upstream 5.0kb upstream 6509 true scaffold_9: 37992873-37999381 Theobroma cacao
Thecc1EG041496 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 37992873-37997872 Theobroma cacao
Thecc1EG041496 5.0kb downstream 5.0kb downstream 6509 true scaffold_9: 37997873-38004381 Theobroma cacao
Thecc1EG041496 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 37999382-38004381 Theobroma cacao
Thecc1EG041496 10.0kb upstream 10.0kb upstream 11509 true scaffold_9: 37987873-37999381 Theobroma cacao
Thecc1EG041496 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 37987873-37997872 Theobroma cacao
Thecc1EG041496 10.0kb downstream 10.0kb downstream 11509 true scaffold_9: 37997873-38009381 Theobroma cacao
Thecc1EG041496 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 37999382-38009381 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823115 5264 Brassicales-Malvales Singleton cluster - no MSA
124319216 5266 SBM Singleton cluster - no MSA
124167784 5268 Malvidae Singleton cluster - no MSA
124067116 5270 Rosid View MSA
123738780 5271 Pentapetalae View MSA
122790707 5272 Eudicot View MSA
122046282 5273 Angiosperm View MSA
121347337 5274 Embryophyte View MSA
123380530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain