Gene : Thecc1EG041481 T. cacao v1.1

Defline:  (1 of 2) PTHR10996:SF108 - D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN Genomic Order:  2842
Name:  ? Thecc1EG041481 Secondary Identifier:  ? PAC:27426647

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041481 0.5kb upstream 0.5kb upstream 6351 true scaffold_9: 37927480-37933830 Theobroma cacao
Thecc1EG041481 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 37933331-37933830 Theobroma cacao
Thecc1EG041481 0.5kb downstream 0.5kb downstream 6351 true scaffold_9: 37926980-37933330 Theobroma cacao
Thecc1EG041481 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 37926980-37927479 Theobroma cacao
Thecc1EG041481 1.0kb upstream 1.0kb upstream 6851 true scaffold_9: 37927480-37934330 Theobroma cacao
Thecc1EG041481 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 37933331-37934330 Theobroma cacao
Thecc1EG041481 1.0kb downstream 1.0kb downstream 6851 true scaffold_9: 37926480-37933330 Theobroma cacao
Thecc1EG041481 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 37926480-37927479 Theobroma cacao
Thecc1EG041481 2.0kb upstream 2.0kb upstream 7851 true scaffold_9: 37927480-37935330 Theobroma cacao
Thecc1EG041481 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 37933331-37935330 Theobroma cacao
Thecc1EG041481 2.0kb downstream 2.0kb downstream 7851 true scaffold_9: 37925480-37933330 Theobroma cacao
Thecc1EG041481 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 37925480-37927479 Theobroma cacao
Thecc1EG041481 5.0kb upstream 5.0kb upstream 10851 true scaffold_9: 37927480-37938330 Theobroma cacao
Thecc1EG041481 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 37933331-37938330 Theobroma cacao
Thecc1EG041481 5.0kb downstream 5.0kb downstream 10851 true scaffold_9: 37922480-37933330 Theobroma cacao
Thecc1EG041481 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 37922480-37927479 Theobroma cacao
Thecc1EG041481 10.0kb upstream 10.0kb upstream 15851 true scaffold_9: 37927480-37943330 Theobroma cacao
Thecc1EG041481 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 37933331-37943330 Theobroma cacao
Thecc1EG041481 10.0kb downstream 10.0kb downstream 15851 true scaffold_9: 37917480-37933330 Theobroma cacao
Thecc1EG041481 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 37917480-37927479 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831607 5264 Brassicales-Malvales View MSA
124340325 5266 SBM View MSA
124237310 5268 Malvidae View MSA
124063088 5270 Rosid View MSA
123747580 5271 Pentapetalae View MSA
122795035 5272 Eudicot View MSA
122051675 5273 Angiosperm View MSA
121344696 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain