Gene : Thecc1EG041466 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2828
Name:  ? Thecc1EG041466 Secondary Identifier:  ? PAC:27427684
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041466 0.5kb upstream 0.5kb upstream 4541 true scaffold_9: 37836777-37841317 Theobroma cacao
Thecc1EG041466 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 37840818-37841317 Theobroma cacao
Thecc1EG041466 0.5kb downstream 0.5kb downstream 4541 true scaffold_9: 37836277-37840817 Theobroma cacao
Thecc1EG041466 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 37836277-37836776 Theobroma cacao
Thecc1EG041466 1.0kb upstream 1.0kb upstream 5041 true scaffold_9: 37836777-37841817 Theobroma cacao
Thecc1EG041466 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 37840818-37841817 Theobroma cacao
Thecc1EG041466 1.0kb downstream 1.0kb downstream 5041 true scaffold_9: 37835777-37840817 Theobroma cacao
Thecc1EG041466 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 37835777-37836776 Theobroma cacao
Thecc1EG041466 2.0kb upstream 2.0kb upstream 6041 true scaffold_9: 37836777-37842817 Theobroma cacao
Thecc1EG041466 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 37840818-37842817 Theobroma cacao
Thecc1EG041466 2.0kb downstream 2.0kb downstream 6041 true scaffold_9: 37834777-37840817 Theobroma cacao
Thecc1EG041466 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 37834777-37836776 Theobroma cacao
Thecc1EG041466 5.0kb upstream 5.0kb upstream 9041 true scaffold_9: 37836777-37845817 Theobroma cacao
Thecc1EG041466 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 37840818-37845817 Theobroma cacao
Thecc1EG041466 5.0kb downstream 5.0kb downstream 9041 true scaffold_9: 37831777-37840817 Theobroma cacao
Thecc1EG041466 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 37831777-37836776 Theobroma cacao
Thecc1EG041466 10.0kb upstream 10.0kb upstream 14041 true scaffold_9: 37836777-37850817 Theobroma cacao
Thecc1EG041466 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 37840818-37850817 Theobroma cacao
Thecc1EG041466 10.0kb downstream 10.0kb downstream 14041 true scaffold_9: 37826777-37840817 Theobroma cacao
Thecc1EG041466 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 37826777-37836776 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826631 5264 Brassicales-Malvales View MSA
124321118 5266 SBM View MSA
124168909 5268 Malvidae View MSA
124074118 5270 Rosid View MSA
123647021 5271 Pentapetalae View MSA
122797350 5272 Eudicot View MSA
122049070 5273 Angiosperm View MSA
121311235 5274 Embryophyte View MSA
123348556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain