Gene : Thecc1EG041448 T. cacao v1.1
Defline:  (1 of 2) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) Genomic Order:  2812
Name:  ? Thecc1EG041448 Secondary Identifier:  ? PAC:27430375
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041448 0.5kb upstream 0.5kb upstream 7575 true scaffold_9: 37702756-37710330 Theobroma cacao
Thecc1EG041448 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 37702756-37703255 Theobroma cacao
Thecc1EG041448 0.5kb downstream 0.5kb downstream 7575 true scaffold_9: 37703256-37710830 Theobroma cacao
Thecc1EG041448 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 37710331-37710830 Theobroma cacao
Thecc1EG041448 1.0kb upstream 1.0kb upstream 8075 true scaffold_9: 37702256-37710330 Theobroma cacao
Thecc1EG041448 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 37702256-37703255 Theobroma cacao
Thecc1EG041448 1.0kb downstream 1.0kb downstream 8075 true scaffold_9: 37703256-37711330 Theobroma cacao
Thecc1EG041448 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 37710331-37711330 Theobroma cacao
Thecc1EG041448 2.0kb upstream 2.0kb upstream 9075 true scaffold_9: 37701256-37710330 Theobroma cacao
Thecc1EG041448 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 37701256-37703255 Theobroma cacao
Thecc1EG041448 2.0kb downstream 2.0kb downstream 9075 true scaffold_9: 37703256-37712330 Theobroma cacao
Thecc1EG041448 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 37710331-37712330 Theobroma cacao
Thecc1EG041448 5.0kb upstream 5.0kb upstream 12075 true scaffold_9: 37698256-37710330 Theobroma cacao
Thecc1EG041448 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 37698256-37703255 Theobroma cacao
Thecc1EG041448 5.0kb downstream 5.0kb downstream 12075 true scaffold_9: 37703256-37715330 Theobroma cacao
Thecc1EG041448 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 37710331-37715330 Theobroma cacao
Thecc1EG041448 10.0kb upstream 10.0kb upstream 17075 true scaffold_9: 37693256-37710330 Theobroma cacao
Thecc1EG041448 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 37693256-37703255 Theobroma cacao
Thecc1EG041448 10.0kb downstream 10.0kb downstream 17075 true scaffold_9: 37703256-37720330 Theobroma cacao
Thecc1EG041448 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 37710331-37720330 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040967 5273 Angiosperm View MSA
123838634 5264 Brassicales-Malvales View MSA
124345021 5266 SBM View MSA
124239151 5268 Malvidae View MSA
124065448 5270 Rosid View MSA
123749867 5271 Pentapetalae View MSA
122796132 5272 Eudicot View MSA
121350779 5274 Embryophyte View MSA
123428117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain