Gene : Thecc1EG041683 T. cacao v1.1
Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Genomic Order:  3020
Name:  ? Thecc1EG041683 Secondary Identifier:  ? PAC:27430080
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7238 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041683 0.5kb upstream 0.5kb upstream 7901 true scaffold_9: 39068427-39076327 Theobroma cacao
Thecc1EG041683 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39068427-39068926 Theobroma cacao
Thecc1EG041683 0.5kb downstream 0.5kb downstream 7901 true scaffold_9: 39068927-39076827 Theobroma cacao
Thecc1EG041683 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39076328-39076827 Theobroma cacao
Thecc1EG041683 1.0kb upstream 1.0kb upstream 8401 true scaffold_9: 39067927-39076327 Theobroma cacao
Thecc1EG041683 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39067927-39068926 Theobroma cacao
Thecc1EG041683 1.0kb downstream 1.0kb downstream 8401 true scaffold_9: 39068927-39077327 Theobroma cacao
Thecc1EG041683 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39076328-39077327 Theobroma cacao
Thecc1EG041683 2.0kb upstream 2.0kb upstream 9401 true scaffold_9: 39066927-39076327 Theobroma cacao
Thecc1EG041683 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39066927-39068926 Theobroma cacao
Thecc1EG041683 2.0kb downstream 2.0kb downstream 9401 true scaffold_9: 39068927-39078327 Theobroma cacao
Thecc1EG041683 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39076328-39078327 Theobroma cacao
Thecc1EG041683 5.0kb upstream 5.0kb upstream 12401 true scaffold_9: 39063927-39076327 Theobroma cacao
Thecc1EG041683 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39063927-39068926 Theobroma cacao
Thecc1EG041683 5.0kb downstream 5.0kb downstream 12401 true scaffold_9: 39068927-39081327 Theobroma cacao
Thecc1EG041683 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39076328-39081327 Theobroma cacao
Thecc1EG041683 10.0kb upstream 10.0kb upstream 17401 true scaffold_9: 39058927-39076327 Theobroma cacao
Thecc1EG041683 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39058927-39068926 Theobroma cacao
Thecc1EG041683 10.0kb downstream 10.0kb downstream 17401 true scaffold_9: 39068927-39086327 Theobroma cacao
Thecc1EG041683 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39076328-39086327 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834640 5264 Brassicales-Malvales View MSA
124341676 5266 SBM View MSA
124237010 5268 Malvidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain