Gene : Thecc1EG041646 T. cacao v1.1
Defline:  (1 of 2) 2.1.1.148//4.1.3.27 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase // Anthranilate synthase Genomic Order:  2989
Name:  ? Thecc1EG041646 Secondary Identifier:  ? PAC:27429389
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6545 Theobroma cacao pathologic  
Tcacao TRPSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041646 0.5kb upstream 0.5kb upstream 5355 true scaffold_9: 38893612-38898966 Theobroma cacao
Thecc1EG041646 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38898467-38898966 Theobroma cacao
Thecc1EG041646 0.5kb downstream 0.5kb downstream 5355 true scaffold_9: 38893112-38898466 Theobroma cacao
Thecc1EG041646 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38893112-38893611 Theobroma cacao
Thecc1EG041646 1.0kb upstream 1.0kb upstream 5855 true scaffold_9: 38893612-38899466 Theobroma cacao
Thecc1EG041646 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38898467-38899466 Theobroma cacao
Thecc1EG041646 1.0kb downstream 1.0kb downstream 5855 true scaffold_9: 38892612-38898466 Theobroma cacao
Thecc1EG041646 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38892612-38893611 Theobroma cacao
Thecc1EG041646 2.0kb upstream 2.0kb upstream 6855 true scaffold_9: 38893612-38900466 Theobroma cacao
Thecc1EG041646 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38898467-38900466 Theobroma cacao
Thecc1EG041646 2.0kb downstream 2.0kb downstream 6855 true scaffold_9: 38891612-38898466 Theobroma cacao
Thecc1EG041646 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38891612-38893611 Theobroma cacao
Thecc1EG041646 5.0kb upstream 5.0kb upstream 9855 true scaffold_9: 38893612-38903466 Theobroma cacao
Thecc1EG041646 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38898467-38903466 Theobroma cacao
Thecc1EG041646 5.0kb downstream 5.0kb downstream 9855 true scaffold_9: 38888612-38898466 Theobroma cacao
Thecc1EG041646 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38888612-38893611 Theobroma cacao
Thecc1EG041646 10.0kb upstream 10.0kb upstream 14855 true scaffold_9: 38893612-38908466 Theobroma cacao
Thecc1EG041646 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38898467-38908466 Theobroma cacao
Thecc1EG041646 10.0kb downstream 10.0kb downstream 14855 true scaffold_9: 38883612-38898466 Theobroma cacao
Thecc1EG041646 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38883612-38893611 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain