Gene : Thecc1EG041647 T. cacao v1.1
Defline:  (1 of 2) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  2990
Name:  ? Thecc1EG041647 Secondary Identifier:  ? PAC:27430873
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041647 0.5kb upstream 0.5kb upstream 2650 true scaffold_9: 38899113-38901762 Theobroma cacao
Thecc1EG041647 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38899113-38899612 Theobroma cacao
Thecc1EG041647 0.5kb downstream 0.5kb downstream 2650 true scaffold_9: 38899613-38902262 Theobroma cacao
Thecc1EG041647 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38901763-38902262 Theobroma cacao
Thecc1EG041647 1.0kb upstream 1.0kb upstream 3150 true scaffold_9: 38898613-38901762 Theobroma cacao
Thecc1EG041647 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38898613-38899612 Theobroma cacao
Thecc1EG041647 1.0kb downstream 1.0kb downstream 3150 true scaffold_9: 38899613-38902762 Theobroma cacao
Thecc1EG041647 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38901763-38902762 Theobroma cacao
Thecc1EG041647 2.0kb upstream 2.0kb upstream 4150 true scaffold_9: 38897613-38901762 Theobroma cacao
Thecc1EG041647 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38897613-38899612 Theobroma cacao
Thecc1EG041647 2.0kb downstream 2.0kb downstream 4150 true scaffold_9: 38899613-38903762 Theobroma cacao
Thecc1EG041647 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38901763-38903762 Theobroma cacao
Thecc1EG041647 5.0kb upstream 5.0kb upstream 7150 true scaffold_9: 38894613-38901762 Theobroma cacao
Thecc1EG041647 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38894613-38899612 Theobroma cacao
Thecc1EG041647 5.0kb downstream 5.0kb downstream 7150 true scaffold_9: 38899613-38906762 Theobroma cacao
Thecc1EG041647 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38901763-38906762 Theobroma cacao
Thecc1EG041647 10.0kb upstream 10.0kb upstream 12150 true scaffold_9: 38889613-38901762 Theobroma cacao
Thecc1EG041647 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38889613-38899612 Theobroma cacao
Thecc1EG041647 10.0kb downstream 10.0kb downstream 12150 true scaffold_9: 38899613-38911762 Theobroma cacao
Thecc1EG041647 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38901763-38911762 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121525201 5273 Angiosperm View MSA
123826643 5264 Brassicales-Malvales View MSA
124321122 5266 SBM View MSA
124168911 5268 Malvidae View MSA
123892155 5270 Rosid View MSA
123474372 5271 Pentapetalae View MSA
122509648 5272 Eudicot View MSA
120797972 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain