Gene : Thecc1EG041630 T. cacao v1.1

Defline:  (1 of 2) PTHR10291//PTHR10291:SF6 - DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE // DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 1-RELATED Genomic Order:  2974
Name:  ? Thecc1EG041630 Secondary Identifier:  ? PAC:27430514

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041630 0.5kb upstream 0.5kb upstream 3582 true scaffold_9: 38834490-38838071 Theobroma cacao
Thecc1EG041630 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38834490-38834989 Theobroma cacao
Thecc1EG041630 0.5kb downstream 0.5kb downstream 3582 true scaffold_9: 38834990-38838571 Theobroma cacao
Thecc1EG041630 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38838072-38838571 Theobroma cacao
Thecc1EG041630 1.0kb upstream 1.0kb upstream 4082 true scaffold_9: 38833990-38838071 Theobroma cacao
Thecc1EG041630 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38833990-38834989 Theobroma cacao
Thecc1EG041630 1.0kb downstream 1.0kb downstream 4082 true scaffold_9: 38834990-38839071 Theobroma cacao
Thecc1EG041630 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38838072-38839071 Theobroma cacao
Thecc1EG041630 2.0kb upstream 2.0kb upstream 5082 true scaffold_9: 38832990-38838071 Theobroma cacao
Thecc1EG041630 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38832990-38834989 Theobroma cacao
Thecc1EG041630 2.0kb downstream 2.0kb downstream 5082 true scaffold_9: 38834990-38840071 Theobroma cacao
Thecc1EG041630 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38838072-38840071 Theobroma cacao
Thecc1EG041630 5.0kb upstream 5.0kb upstream 8082 true scaffold_9: 38829990-38838071 Theobroma cacao
Thecc1EG041630 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38829990-38834989 Theobroma cacao
Thecc1EG041630 5.0kb downstream 5.0kb downstream 8082 true scaffold_9: 38834990-38843071 Theobroma cacao
Thecc1EG041630 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38838072-38843071 Theobroma cacao
Thecc1EG041630 10.0kb upstream 10.0kb upstream 13082 true scaffold_9: 38824990-38838071 Theobroma cacao
Thecc1EG041630 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38824990-38834989 Theobroma cacao
Thecc1EG041630 10.0kb downstream 10.0kb downstream 13082 true scaffold_9: 38834990-38848071 Theobroma cacao
Thecc1EG041630 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38838072-38848071 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832786 5264 Brassicales-Malvales View MSA
124348004 5266 SBM View MSA
124237642 5268 Malvidae View MSA
124065300 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain