Gene : Thecc1EG041560 T. cacao v1.1
Defline:  (1 of 2) PTHR31065:SF4 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  2914
Name:  ? Thecc1EG041560 Secondary Identifier:  ? PAC:27428286
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041560 0.5kb upstream 0.5kb upstream 2212 true scaffold_9: 38410367-38412578 Theobroma cacao
Thecc1EG041560 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38410367-38410866 Theobroma cacao
Thecc1EG041560 0.5kb downstream 0.5kb downstream 2212 true scaffold_9: 38410867-38413078 Theobroma cacao
Thecc1EG041560 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38412579-38413078 Theobroma cacao
Thecc1EG041560 1.0kb upstream 1.0kb upstream 2712 true scaffold_9: 38409867-38412578 Theobroma cacao
Thecc1EG041560 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38409867-38410866 Theobroma cacao
Thecc1EG041560 1.0kb downstream 1.0kb downstream 2712 true scaffold_9: 38410867-38413578 Theobroma cacao
Thecc1EG041560 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38412579-38413578 Theobroma cacao
Thecc1EG041560 2.0kb upstream 2.0kb upstream 3712 true scaffold_9: 38408867-38412578 Theobroma cacao
Thecc1EG041560 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38408867-38410866 Theobroma cacao
Thecc1EG041560 2.0kb downstream 2.0kb downstream 3712 true scaffold_9: 38410867-38414578 Theobroma cacao
Thecc1EG041560 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38412579-38414578 Theobroma cacao
Thecc1EG041560 5.0kb upstream 5.0kb upstream 6712 true scaffold_9: 38405867-38412578 Theobroma cacao
Thecc1EG041560 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38405867-38410866 Theobroma cacao
Thecc1EG041560 5.0kb downstream 5.0kb downstream 6712 true scaffold_9: 38410867-38417578 Theobroma cacao
Thecc1EG041560 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38412579-38417578 Theobroma cacao
Thecc1EG041560 10.0kb upstream 10.0kb upstream 11712 true scaffold_9: 38400867-38412578 Theobroma cacao
Thecc1EG041560 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38400867-38410866 Theobroma cacao
Thecc1EG041560 10.0kb downstream 10.0kb downstream 11712 true scaffold_9: 38410867-38422578 Theobroma cacao
Thecc1EG041560 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38412579-38422578 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838046 5264 Brassicales-Malvales View MSA
124345937 5266 SBM View MSA
124248577 5268 Malvidae View MSA
124069280 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain