Gene : Thecc1EG041859 T. cacao v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  3179
Name:  ? Thecc1EG041859 Secondary Identifier:  ? PAC:27430507
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041859 0.5kb upstream 0.5kb upstream 6356 true scaffold_9: 39839622-39845977 Theobroma cacao
Thecc1EG041859 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39839622-39840121 Theobroma cacao
Thecc1EG041859 0.5kb downstream 0.5kb downstream 6356 true scaffold_9: 39840122-39846477 Theobroma cacao
Thecc1EG041859 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39845978-39846477 Theobroma cacao
Thecc1EG041859 1.0kb upstream 1.0kb upstream 6856 true scaffold_9: 39839122-39845977 Theobroma cacao
Thecc1EG041859 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39839122-39840121 Theobroma cacao
Thecc1EG041859 1.0kb downstream 1.0kb downstream 6856 true scaffold_9: 39840122-39846977 Theobroma cacao
Thecc1EG041859 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39845978-39846977 Theobroma cacao
Thecc1EG041859 2.0kb upstream 2.0kb upstream 7856 true scaffold_9: 39838122-39845977 Theobroma cacao
Thecc1EG041859 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39838122-39840121 Theobroma cacao
Thecc1EG041859 2.0kb downstream 2.0kb downstream 7856 true scaffold_9: 39840122-39847977 Theobroma cacao
Thecc1EG041859 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39845978-39847977 Theobroma cacao
Thecc1EG041859 5.0kb upstream 5.0kb upstream 10856 true scaffold_9: 39835122-39845977 Theobroma cacao
Thecc1EG041859 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39835122-39840121 Theobroma cacao
Thecc1EG041859 5.0kb downstream 5.0kb downstream 10856 true scaffold_9: 39840122-39850977 Theobroma cacao
Thecc1EG041859 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39845978-39850977 Theobroma cacao
Thecc1EG041859 10.0kb upstream 10.0kb upstream 15856 true scaffold_9: 39830122-39845977 Theobroma cacao
Thecc1EG041859 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39830122-39840121 Theobroma cacao
Thecc1EG041859 10.0kb downstream 10.0kb downstream 15856 true scaffold_9: 39840122-39855977 Theobroma cacao
Thecc1EG041859 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39845978-39855977 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
123827412 5264 Brassicales-Malvales View MSA
124342810 5266 SBM View MSA
124240381 5268 Malvidae View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain