Gene : Thecc1EG041831 T. cacao v1.1
Defline:  (1 of 4) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3153
Name:  ? Thecc1EG041831 Secondary Identifier:  ? PAC:27426557
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041831 0.5kb upstream 0.5kb upstream 2769 true scaffold_9: 39732907-39735675 Theobroma cacao
Thecc1EG041831 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39735176-39735675 Theobroma cacao
Thecc1EG041831 0.5kb downstream 0.5kb downstream 2769 true scaffold_9: 39732407-39735175 Theobroma cacao
Thecc1EG041831 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39732407-39732906 Theobroma cacao
Thecc1EG041831 1.0kb upstream 1.0kb upstream 3269 true scaffold_9: 39732907-39736175 Theobroma cacao
Thecc1EG041831 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39735176-39736175 Theobroma cacao
Thecc1EG041831 1.0kb downstream 1.0kb downstream 3269 true scaffold_9: 39731907-39735175 Theobroma cacao
Thecc1EG041831 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39731907-39732906 Theobroma cacao
Thecc1EG041831 2.0kb upstream 2.0kb upstream 4269 true scaffold_9: 39732907-39737175 Theobroma cacao
Thecc1EG041831 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39735176-39737175 Theobroma cacao
Thecc1EG041831 2.0kb downstream 2.0kb downstream 4269 true scaffold_9: 39730907-39735175 Theobroma cacao
Thecc1EG041831 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39730907-39732906 Theobroma cacao
Thecc1EG041831 5.0kb upstream 5.0kb upstream 7269 true scaffold_9: 39732907-39740175 Theobroma cacao
Thecc1EG041831 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39735176-39740175 Theobroma cacao
Thecc1EG041831 5.0kb downstream 5.0kb downstream 7269 true scaffold_9: 39727907-39735175 Theobroma cacao
Thecc1EG041831 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39727907-39732906 Theobroma cacao
Thecc1EG041831 10.0kb upstream 10.0kb upstream 12269 true scaffold_9: 39732907-39745175 Theobroma cacao
Thecc1EG041831 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39735176-39745175 Theobroma cacao
Thecc1EG041831 10.0kb downstream 10.0kb downstream 12269 true scaffold_9: 39722907-39735175 Theobroma cacao
Thecc1EG041831 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39722907-39732906 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841705 5264 Brassicales-Malvales View MSA
124337529 5266 SBM View MSA
124244878 5268 Malvidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain