Gene : Thecc1EG041821 T. cacao v1.1

Defline:  (1 of 1) PTHR11062//PTHR11062:SF86 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  3144
Name:  ? Thecc1EG041821 Secondary Identifier:  ? PAC:27427053

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041821 0.5kb upstream 0.5kb upstream 3210 true scaffold_9: 39680676-39683885 Theobroma cacao
Thecc1EG041821 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39683386-39683885 Theobroma cacao
Thecc1EG041821 0.5kb downstream 0.5kb downstream 3210 true scaffold_9: 39680176-39683385 Theobroma cacao
Thecc1EG041821 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39680176-39680675 Theobroma cacao
Thecc1EG041821 1.0kb upstream 1.0kb upstream 3710 true scaffold_9: 39680676-39684385 Theobroma cacao
Thecc1EG041821 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39683386-39684385 Theobroma cacao
Thecc1EG041821 1.0kb downstream 1.0kb downstream 3710 true scaffold_9: 39679676-39683385 Theobroma cacao
Thecc1EG041821 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39679676-39680675 Theobroma cacao
Thecc1EG041821 2.0kb upstream 2.0kb upstream 4710 true scaffold_9: 39680676-39685385 Theobroma cacao
Thecc1EG041821 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39683386-39685385 Theobroma cacao
Thecc1EG041821 2.0kb downstream 2.0kb downstream 4710 true scaffold_9: 39678676-39683385 Theobroma cacao
Thecc1EG041821 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39678676-39680675 Theobroma cacao
Thecc1EG041821 5.0kb upstream 5.0kb upstream 7710 true scaffold_9: 39680676-39688385 Theobroma cacao
Thecc1EG041821 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39683386-39688385 Theobroma cacao
Thecc1EG041821 5.0kb downstream 5.0kb downstream 7710 true scaffold_9: 39675676-39683385 Theobroma cacao
Thecc1EG041821 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39675676-39680675 Theobroma cacao
Thecc1EG041821 10.0kb upstream 10.0kb upstream 12710 true scaffold_9: 39680676-39693385 Theobroma cacao
Thecc1EG041821 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39683386-39693385 Theobroma cacao
Thecc1EG041821 10.0kb downstream 10.0kb downstream 12710 true scaffold_9: 39670676-39683385 Theobroma cacao
Thecc1EG041821 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39670676-39680675 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838924 5264 Brassicales-Malvales View MSA
124322520 5266 SBM View MSA
124244382 5268 Malvidae View MSA
124072625 5270 Rosid View MSA
123753744 5271 Pentapetalae View MSA
122797324 5272 Eudicot View MSA
122043990 5273 Angiosperm View MSA
121348270 5274 Embryophyte View MSA
123380801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain