Gene : Thecc1EG041814 T. cacao v1.1
Defline:  (1 of 2) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  3138
Name:  ? Thecc1EG041814 Secondary Identifier:  ? PAC:27427820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041814 0.5kb upstream 0.5kb upstream 7683 true scaffold_9: 39637751-39645433 Theobroma cacao
Thecc1EG041814 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39644934-39645433 Theobroma cacao
Thecc1EG041814 0.5kb downstream 0.5kb downstream 7683 true scaffold_9: 39637251-39644933 Theobroma cacao
Thecc1EG041814 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39637251-39637750 Theobroma cacao
Thecc1EG041814 1.0kb upstream 1.0kb upstream 8183 true scaffold_9: 39637751-39645933 Theobroma cacao
Thecc1EG041814 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39644934-39645933 Theobroma cacao
Thecc1EG041814 1.0kb downstream 1.0kb downstream 8183 true scaffold_9: 39636751-39644933 Theobroma cacao
Thecc1EG041814 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39636751-39637750 Theobroma cacao
Thecc1EG041814 2.0kb upstream 2.0kb upstream 9183 true scaffold_9: 39637751-39646933 Theobroma cacao
Thecc1EG041814 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39644934-39646933 Theobroma cacao
Thecc1EG041814 2.0kb downstream 2.0kb downstream 9183 true scaffold_9: 39635751-39644933 Theobroma cacao
Thecc1EG041814 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39635751-39637750 Theobroma cacao
Thecc1EG041814 5.0kb upstream 5.0kb upstream 12183 true scaffold_9: 39637751-39649933 Theobroma cacao
Thecc1EG041814 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39644934-39649933 Theobroma cacao
Thecc1EG041814 5.0kb downstream 5.0kb downstream 12183 true scaffold_9: 39632751-39644933 Theobroma cacao
Thecc1EG041814 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39632751-39637750 Theobroma cacao
Thecc1EG041814 10.0kb upstream 10.0kb upstream 17183 true scaffold_9: 39637751-39654933 Theobroma cacao
Thecc1EG041814 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39644934-39654933 Theobroma cacao
Thecc1EG041814 10.0kb downstream 10.0kb downstream 17183 true scaffold_9: 39627751-39644933 Theobroma cacao
Thecc1EG041814 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39627751-39637750 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826334 5264 Brassicales-Malvales View MSA
124351373 5266 SBM View MSA
124246157 5268 Malvidae View MSA
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain