Gene : Thecc1EG041815 T. cacao v1.1
Defline:  (1 of 2) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  3139
Name:  ? Thecc1EG041815 Secondary Identifier:  ? PAC:27429801
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041815 0.5kb upstream 0.5kb upstream 4527 true scaffold_9: 39644929-39649455 Theobroma cacao
Thecc1EG041815 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39648956-39649455 Theobroma cacao
Thecc1EG041815 0.5kb downstream 0.5kb downstream 4527 true scaffold_9: 39644429-39648955 Theobroma cacao
Thecc1EG041815 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39644429-39644928 Theobroma cacao
Thecc1EG041815 1.0kb upstream 1.0kb upstream 5027 true scaffold_9: 39644929-39649955 Theobroma cacao
Thecc1EG041815 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39648956-39649955 Theobroma cacao
Thecc1EG041815 1.0kb downstream 1.0kb downstream 5027 true scaffold_9: 39643929-39648955 Theobroma cacao
Thecc1EG041815 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39643929-39644928 Theobroma cacao
Thecc1EG041815 2.0kb upstream 2.0kb upstream 6027 true scaffold_9: 39644929-39650955 Theobroma cacao
Thecc1EG041815 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39648956-39650955 Theobroma cacao
Thecc1EG041815 2.0kb downstream 2.0kb downstream 6027 true scaffold_9: 39642929-39648955 Theobroma cacao
Thecc1EG041815 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39642929-39644928 Theobroma cacao
Thecc1EG041815 5.0kb upstream 5.0kb upstream 9027 true scaffold_9: 39644929-39653955 Theobroma cacao
Thecc1EG041815 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39648956-39653955 Theobroma cacao
Thecc1EG041815 5.0kb downstream 5.0kb downstream 9027 true scaffold_9: 39639929-39648955 Theobroma cacao
Thecc1EG041815 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39639929-39644928 Theobroma cacao
Thecc1EG041815 10.0kb upstream 10.0kb upstream 14027 true scaffold_9: 39644929-39658955 Theobroma cacao
Thecc1EG041815 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39648956-39658955 Theobroma cacao
Thecc1EG041815 10.0kb downstream 10.0kb downstream 14027 true scaffold_9: 39634929-39648955 Theobroma cacao
Thecc1EG041815 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39634929-39644928 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835350 5264 Brassicales-Malvales View MSA
124351373 5266 SBM View MSA
124246157 5268 Malvidae View MSA
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain