Gene : Thecc1EG041799 T. cacao v1.1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF78 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  3124
Name:  ? Thecc1EG041799 Secondary Identifier:  ? PAC:27427987
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041799 0.5kb upstream 0.5kb upstream 8662 true scaffold_9: 39549600-39558261 Theobroma cacao
Thecc1EG041799 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39549600-39550099 Theobroma cacao
Thecc1EG041799 0.5kb downstream 0.5kb downstream 8662 true scaffold_9: 39550100-39558761 Theobroma cacao
Thecc1EG041799 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39558262-39558761 Theobroma cacao
Thecc1EG041799 1.0kb upstream 1.0kb upstream 9162 true scaffold_9: 39549100-39558261 Theobroma cacao
Thecc1EG041799 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39549100-39550099 Theobroma cacao
Thecc1EG041799 1.0kb downstream 1.0kb downstream 9162 true scaffold_9: 39550100-39559261 Theobroma cacao
Thecc1EG041799 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39558262-39559261 Theobroma cacao
Thecc1EG041799 2.0kb upstream 2.0kb upstream 10162 true scaffold_9: 39548100-39558261 Theobroma cacao
Thecc1EG041799 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39548100-39550099 Theobroma cacao
Thecc1EG041799 2.0kb downstream 2.0kb downstream 10162 true scaffold_9: 39550100-39560261 Theobroma cacao
Thecc1EG041799 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39558262-39560261 Theobroma cacao
Thecc1EG041799 5.0kb upstream 5.0kb upstream 13162 true scaffold_9: 39545100-39558261 Theobroma cacao
Thecc1EG041799 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39545100-39550099 Theobroma cacao
Thecc1EG041799 5.0kb downstream 5.0kb downstream 13162 true scaffold_9: 39550100-39563261 Theobroma cacao
Thecc1EG041799 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39558262-39563261 Theobroma cacao
Thecc1EG041799 10.0kb upstream 10.0kb upstream 18162 true scaffold_9: 39540100-39558261 Theobroma cacao
Thecc1EG041799 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39540100-39550099 Theobroma cacao
Thecc1EG041799 10.0kb downstream 10.0kb downstream 18162 true scaffold_9: 39550100-39568261 Theobroma cacao
Thecc1EG041799 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39558262-39568261 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827941 5264 Brassicales-Malvales View MSA
124347592 5266 SBM View MSA
124253121 5268 Malvidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain