Gene : Thecc1EG041785 T. cacao v1.1
Defline:  Uncharacterized protein (48%P) Genomic Order:  3111
Name:  ? Thecc1EG041785 Secondary Identifier:  ? PAC:27430831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041785 0.5kb upstream 0.5kb upstream 2862 true scaffold_9: 39498519-39501380 Theobroma cacao
Thecc1EG041785 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39500881-39501380 Theobroma cacao
Thecc1EG041785 0.5kb downstream 0.5kb downstream 2862 true scaffold_9: 39498019-39500880 Theobroma cacao
Thecc1EG041785 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39498019-39498518 Theobroma cacao
Thecc1EG041785 1.0kb upstream 1.0kb upstream 3362 true scaffold_9: 39498519-39501880 Theobroma cacao
Thecc1EG041785 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39500881-39501880 Theobroma cacao
Thecc1EG041785 1.0kb downstream 1.0kb downstream 3362 true scaffold_9: 39497519-39500880 Theobroma cacao
Thecc1EG041785 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39497519-39498518 Theobroma cacao
Thecc1EG041785 2.0kb upstream 2.0kb upstream 4362 true scaffold_9: 39498519-39502880 Theobroma cacao
Thecc1EG041785 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39500881-39502880 Theobroma cacao
Thecc1EG041785 2.0kb downstream 2.0kb downstream 4362 true scaffold_9: 39496519-39500880 Theobroma cacao
Thecc1EG041785 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39496519-39498518 Theobroma cacao
Thecc1EG041785 5.0kb upstream 5.0kb upstream 7362 true scaffold_9: 39498519-39505880 Theobroma cacao
Thecc1EG041785 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39500881-39505880 Theobroma cacao
Thecc1EG041785 5.0kb downstream 5.0kb downstream 7362 true scaffold_9: 39493519-39500880 Theobroma cacao
Thecc1EG041785 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39493519-39498518 Theobroma cacao
Thecc1EG041785 10.0kb upstream 10.0kb upstream 12362 true scaffold_9: 39498519-39510880 Theobroma cacao
Thecc1EG041785 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39500881-39510880 Theobroma cacao
Thecc1EG041785 10.0kb downstream 10.0kb downstream 12362 true scaffold_9: 39488519-39500880 Theobroma cacao
Thecc1EG041785 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39488519-39498518 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839399 5264 Brassicales-Malvales View MSA
124341000 5266 SBM View MSA
124239565 5268 Malvidae View MSA
124074945 5270 Rosid View MSA
123744651 5271 Pentapetalae View MSA
122789630 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain