Gene : Thecc1EG041779 T. cacao v1.1
Defline:  (1 of 1) K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Genomic Order:  3105
Name:  ? Thecc1EG041779 Secondary Identifier:  ? PAC:27427052
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041779 0.5kb upstream 0.5kb upstream 5263 true scaffold_9: 39467513-39472775 Theobroma cacao
Thecc1EG041779 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39467513-39468012 Theobroma cacao
Thecc1EG041779 0.5kb downstream 0.5kb downstream 5263 true scaffold_9: 39468013-39473275 Theobroma cacao
Thecc1EG041779 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39472776-39473275 Theobroma cacao
Thecc1EG041779 1.0kb upstream 1.0kb upstream 5763 true scaffold_9: 39467013-39472775 Theobroma cacao
Thecc1EG041779 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39467013-39468012 Theobroma cacao
Thecc1EG041779 1.0kb downstream 1.0kb downstream 5763 true scaffold_9: 39468013-39473775 Theobroma cacao
Thecc1EG041779 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39472776-39473775 Theobroma cacao
Thecc1EG041779 2.0kb upstream 2.0kb upstream 6763 true scaffold_9: 39466013-39472775 Theobroma cacao
Thecc1EG041779 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39466013-39468012 Theobroma cacao
Thecc1EG041779 2.0kb downstream 2.0kb downstream 6763 true scaffold_9: 39468013-39474775 Theobroma cacao
Thecc1EG041779 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39472776-39474775 Theobroma cacao
Thecc1EG041779 5.0kb upstream 5.0kb upstream 9763 true scaffold_9: 39463013-39472775 Theobroma cacao
Thecc1EG041779 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39463013-39468012 Theobroma cacao
Thecc1EG041779 5.0kb downstream 5.0kb downstream 9763 true scaffold_9: 39468013-39477775 Theobroma cacao
Thecc1EG041779 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39472776-39477775 Theobroma cacao
Thecc1EG041779 10.0kb upstream 10.0kb upstream 14763 true scaffold_9: 39458013-39472775 Theobroma cacao
Thecc1EG041779 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39458013-39468012 Theobroma cacao
Thecc1EG041779 10.0kb downstream 10.0kb downstream 14763 true scaffold_9: 39468013-39482775 Theobroma cacao
Thecc1EG041779 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39472776-39482775 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837405 5264 Brassicales-Malvales View MSA
124339227 5266 SBM View MSA
124238901 5268 Malvidae View MSA
124063579 5270 Rosid View MSA
123741700 5271 Pentapetalae View MSA
122797200 5272 Eudicot View MSA
122049718 5273 Angiosperm View MSA
121345222 5274 Embryophyte View MSA
123426505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain