Gene : Thecc1EG041782 T. cacao v1.1

Defline:  (1 of 36) PF00069//PF00139 - Protein kinase domain (Pkinase) // Legume lectin domain (Lectin_legB) Genomic Order:  3108
Name:  ? Thecc1EG041782 Secondary Identifier:  ? PAC:27425612

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041782 0.5kb upstream 0.5kb upstream 4380 true scaffold_9: 39479453-39483832 Theobroma cacao
Thecc1EG041782 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39483333-39483832 Theobroma cacao
Thecc1EG041782 0.5kb downstream 0.5kb downstream 4380 true scaffold_9: 39478953-39483332 Theobroma cacao
Thecc1EG041782 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39478953-39479452 Theobroma cacao
Thecc1EG041782 1.0kb upstream 1.0kb upstream 4880 true scaffold_9: 39479453-39484332 Theobroma cacao
Thecc1EG041782 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39483333-39484332 Theobroma cacao
Thecc1EG041782 1.0kb downstream 1.0kb downstream 4880 true scaffold_9: 39478453-39483332 Theobroma cacao
Thecc1EG041782 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39478453-39479452 Theobroma cacao
Thecc1EG041782 2.0kb upstream 2.0kb upstream 5880 true scaffold_9: 39479453-39485332 Theobroma cacao
Thecc1EG041782 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39483333-39485332 Theobroma cacao
Thecc1EG041782 2.0kb downstream 2.0kb downstream 5880 true scaffold_9: 39477453-39483332 Theobroma cacao
Thecc1EG041782 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39477453-39479452 Theobroma cacao
Thecc1EG041782 5.0kb upstream 5.0kb upstream 8880 true scaffold_9: 39479453-39488332 Theobroma cacao
Thecc1EG041782 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39483333-39488332 Theobroma cacao
Thecc1EG041782 5.0kb downstream 5.0kb downstream 8880 true scaffold_9: 39474453-39483332 Theobroma cacao
Thecc1EG041782 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39474453-39479452 Theobroma cacao
Thecc1EG041782 10.0kb upstream 10.0kb upstream 13880 true scaffold_9: 39479453-39493332 Theobroma cacao
Thecc1EG041782 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39483333-39493332 Theobroma cacao
Thecc1EG041782 10.0kb downstream 10.0kb downstream 13880 true scaffold_9: 39469453-39483332 Theobroma cacao
Thecc1EG041782 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39469453-39479452 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826188 5264 Brassicales-Malvales View MSA
124351226 5266 SBM View MSA
124252554 5268 Malvidae View MSA
124071710 5270 Rosid View MSA
123746397 5271 Pentapetalae View MSA
122771896 5272 Eudicot View MSA
122049329 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain