Gene : Thecc1EG041726 T. cacao v1.1
Defline:  (1 of 57) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  3060
Name:  ? Thecc1EG041726 Secondary Identifier:  ? PAC:27427693
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041726 0.5kb upstream 0.5kb upstream 3708 true scaffold_9: 39258271-39261978 Theobroma cacao
Thecc1EG041726 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39261479-39261978 Theobroma cacao
Thecc1EG041726 0.5kb downstream 0.5kb downstream 3708 true scaffold_9: 39257771-39261478 Theobroma cacao
Thecc1EG041726 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39257771-39258270 Theobroma cacao
Thecc1EG041726 1.0kb upstream 1.0kb upstream 4208 true scaffold_9: 39258271-39262478 Theobroma cacao
Thecc1EG041726 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39261479-39262478 Theobroma cacao
Thecc1EG041726 1.0kb downstream 1.0kb downstream 4208 true scaffold_9: 39257271-39261478 Theobroma cacao
Thecc1EG041726 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39257271-39258270 Theobroma cacao
Thecc1EG041726 2.0kb upstream 2.0kb upstream 5208 true scaffold_9: 39258271-39263478 Theobroma cacao
Thecc1EG041726 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39261479-39263478 Theobroma cacao
Thecc1EG041726 2.0kb downstream 2.0kb downstream 5208 true scaffold_9: 39256271-39261478 Theobroma cacao
Thecc1EG041726 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39256271-39258270 Theobroma cacao
Thecc1EG041726 5.0kb upstream 5.0kb upstream 8208 true scaffold_9: 39258271-39266478 Theobroma cacao
Thecc1EG041726 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39261479-39266478 Theobroma cacao
Thecc1EG041726 5.0kb downstream 5.0kb downstream 8208 true scaffold_9: 39253271-39261478 Theobroma cacao
Thecc1EG041726 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39253271-39258270 Theobroma cacao
Thecc1EG041726 10.0kb upstream 10.0kb upstream 13208 true scaffold_9: 39258271-39271478 Theobroma cacao
Thecc1EG041726 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39261479-39271478 Theobroma cacao
Thecc1EG041726 10.0kb downstream 10.0kb downstream 13208 true scaffold_9: 39248271-39261478 Theobroma cacao
Thecc1EG041726 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39248271-39258270 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823117 5264 Brassicales-Malvales Singleton cluster - no MSA
124319218 5266 SBM Singleton cluster - no MSA
124249893 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain