Gene : Thecc1EG042008 T. cacao v1.1
Defline:  (1 of 1) PTHR21499//PTHR21499:SF33 - ASPARTATE KINASE // HOMOSERINE DEHYDROGENASE Genomic Order:  3307
Name:  ? Thecc1EG042008 Secondary Identifier:  ? PAC:27428254
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao HOMOSERSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3001 Theobroma cacao pathologic  
Tcacao PWY-724 Theobroma cacao pathologic  
Tcacao THRESYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042008 0.5kb upstream 0.5kb upstream 5316 true scaffold_9: 40573191-40578506 Theobroma cacao
Thecc1EG042008 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40578007-40578506 Theobroma cacao
Thecc1EG042008 0.5kb downstream 0.5kb downstream 5316 true scaffold_9: 40572691-40578006 Theobroma cacao
Thecc1EG042008 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40572691-40573190 Theobroma cacao
Thecc1EG042008 1.0kb upstream 1.0kb upstream 5816 true scaffold_9: 40573191-40579006 Theobroma cacao
Thecc1EG042008 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40578007-40579006 Theobroma cacao
Thecc1EG042008 1.0kb downstream 1.0kb downstream 5816 true scaffold_9: 40572191-40578006 Theobroma cacao
Thecc1EG042008 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40572191-40573190 Theobroma cacao
Thecc1EG042008 2.0kb upstream 2.0kb upstream 6816 true scaffold_9: 40573191-40580006 Theobroma cacao
Thecc1EG042008 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40578007-40580006 Theobroma cacao
Thecc1EG042008 2.0kb downstream 2.0kb downstream 6816 true scaffold_9: 40571191-40578006 Theobroma cacao
Thecc1EG042008 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40571191-40573190 Theobroma cacao
Thecc1EG042008 5.0kb upstream 5.0kb upstream 9816 true scaffold_9: 40573191-40583006 Theobroma cacao
Thecc1EG042008 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40578007-40583006 Theobroma cacao
Thecc1EG042008 5.0kb downstream 5.0kb downstream 9816 true scaffold_9: 40568191-40578006 Theobroma cacao
Thecc1EG042008 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40568191-40573190 Theobroma cacao
Thecc1EG042008 10.0kb upstream 10.0kb upstream 14816 true scaffold_9: 40573191-40588006 Theobroma cacao
Thecc1EG042008 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40578007-40588006 Theobroma cacao
Thecc1EG042008 10.0kb downstream 10.0kb downstream 14816 true scaffold_9: 40563191-40578006 Theobroma cacao
Thecc1EG042008 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40563191-40573190 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833269 5264 Brassicales-Malvales View MSA
124336802 5266 SBM View MSA
124242430 5268 Malvidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain