Gene : Thecc1EG042004 T. cacao v1.1
Defline:  (1 of 1) PTHR24055:SF214 - MITOGEN-ACTIVATED PROTEIN KINASE 3 Genomic Order:  3303
Name:  ? Thecc1EG042004 Secondary Identifier:  ? PAC:27429048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042004 0.5kb upstream 0.5kb upstream 3338 true scaffold_9: 40556368-40559705 Theobroma cacao
Thecc1EG042004 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40556368-40556867 Theobroma cacao
Thecc1EG042004 0.5kb downstream 0.5kb downstream 3338 true scaffold_9: 40556868-40560205 Theobroma cacao
Thecc1EG042004 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40559706-40560205 Theobroma cacao
Thecc1EG042004 1.0kb upstream 1.0kb upstream 3838 true scaffold_9: 40555868-40559705 Theobroma cacao
Thecc1EG042004 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40555868-40556867 Theobroma cacao
Thecc1EG042004 1.0kb downstream 1.0kb downstream 3838 true scaffold_9: 40556868-40560705 Theobroma cacao
Thecc1EG042004 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40559706-40560705 Theobroma cacao
Thecc1EG042004 2.0kb upstream 2.0kb upstream 4838 true scaffold_9: 40554868-40559705 Theobroma cacao
Thecc1EG042004 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40554868-40556867 Theobroma cacao
Thecc1EG042004 2.0kb downstream 2.0kb downstream 4838 true scaffold_9: 40556868-40561705 Theobroma cacao
Thecc1EG042004 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40559706-40561705 Theobroma cacao
Thecc1EG042004 5.0kb upstream 5.0kb upstream 7838 true scaffold_9: 40551868-40559705 Theobroma cacao
Thecc1EG042004 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40551868-40556867 Theobroma cacao
Thecc1EG042004 5.0kb downstream 5.0kb downstream 7838 true scaffold_9: 40556868-40564705 Theobroma cacao
Thecc1EG042004 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40559706-40564705 Theobroma cacao
Thecc1EG042004 10.0kb upstream 10.0kb upstream 12838 true scaffold_9: 40546868-40559705 Theobroma cacao
Thecc1EG042004 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40546868-40556867 Theobroma cacao
Thecc1EG042004 10.0kb downstream 10.0kb downstream 12838 true scaffold_9: 40556868-40569705 Theobroma cacao
Thecc1EG042004 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40559706-40569705 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833747 5264 Brassicales-Malvales View MSA
124340238 5266 SBM View MSA
124241277 5268 Malvidae View MSA
124066490 5270 Rosid View MSA
123739080 5271 Pentapetalae View MSA
122791748 5272 Eudicot View MSA
122050420 5273 Angiosperm View MSA
121352575 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain