Gene : Thecc1EG041971 T. cacao v1.1
Defline:  (1 of 3) PTHR11177//PTHR11177:SF186 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  3277
Name:  ? Thecc1EG041971 Secondary Identifier:  ? PAC:27428519
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041971 0.5kb upstream 0.5kb upstream 1632 true scaffold_9: 40407148-40408779 Theobroma cacao
Thecc1EG041971 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40407148-40407647 Theobroma cacao
Thecc1EG041971 0.5kb downstream 0.5kb downstream 1632 true scaffold_9: 40407648-40409279 Theobroma cacao
Thecc1EG041971 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40408780-40409279 Theobroma cacao
Thecc1EG041971 1.0kb upstream 1.0kb upstream 2132 true scaffold_9: 40406648-40408779 Theobroma cacao
Thecc1EG041971 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40406648-40407647 Theobroma cacao
Thecc1EG041971 1.0kb downstream 1.0kb downstream 2132 true scaffold_9: 40407648-40409779 Theobroma cacao
Thecc1EG041971 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40408780-40409779 Theobroma cacao
Thecc1EG041971 2.0kb upstream 2.0kb upstream 3132 true scaffold_9: 40405648-40408779 Theobroma cacao
Thecc1EG041971 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40405648-40407647 Theobroma cacao
Thecc1EG041971 2.0kb downstream 2.0kb downstream 3132 true scaffold_9: 40407648-40410779 Theobroma cacao
Thecc1EG041971 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40408780-40410779 Theobroma cacao
Thecc1EG041971 5.0kb upstream 5.0kb upstream 6132 true scaffold_9: 40402648-40408779 Theobroma cacao
Thecc1EG041971 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40402648-40407647 Theobroma cacao
Thecc1EG041971 5.0kb downstream 5.0kb downstream 6132 true scaffold_9: 40407648-40413779 Theobroma cacao
Thecc1EG041971 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40408780-40413779 Theobroma cacao
Thecc1EG041971 10.0kb upstream 10.0kb upstream 11132 true scaffold_9: 40397648-40408779 Theobroma cacao
Thecc1EG041971 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40397648-40407647 Theobroma cacao
Thecc1EG041971 10.0kb downstream 10.0kb downstream 11132 true scaffold_9: 40407648-40418779 Theobroma cacao
Thecc1EG041971 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40408780-40418779 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824771 5264 Brassicales-Malvales View MSA
124348645 5266 SBM View MSA
124246555 5268 Malvidae View MSA
124072600 5270 Rosid View MSA
123749602 5271 Pentapetalae View MSA
122797171 5272 Eudicot View MSA
122049953 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain