Gene : Thecc1EG041948 T. cacao v1.1
Defline:  (1 of 3) PTHR11177//PTHR11177:SF186 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  3261
Name:  ? Thecc1EG041948 Secondary Identifier:  ? PAC:27428811
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041948 0.5kb upstream 0.5kb upstream 1903 true scaffold_9: 40276697-40278599 Theobroma cacao
Thecc1EG041948 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40278100-40278599 Theobroma cacao
Thecc1EG041948 0.5kb downstream 0.5kb downstream 1903 true scaffold_9: 40276197-40278099 Theobroma cacao
Thecc1EG041948 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40276197-40276696 Theobroma cacao
Thecc1EG041948 1.0kb upstream 1.0kb upstream 2403 true scaffold_9: 40276697-40279099 Theobroma cacao
Thecc1EG041948 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40278100-40279099 Theobroma cacao
Thecc1EG041948 1.0kb downstream 1.0kb downstream 2403 true scaffold_9: 40275697-40278099 Theobroma cacao
Thecc1EG041948 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40275697-40276696 Theobroma cacao
Thecc1EG041948 2.0kb upstream 2.0kb upstream 3403 true scaffold_9: 40276697-40280099 Theobroma cacao
Thecc1EG041948 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40278100-40280099 Theobroma cacao
Thecc1EG041948 2.0kb downstream 2.0kb downstream 3403 true scaffold_9: 40274697-40278099 Theobroma cacao
Thecc1EG041948 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40274697-40276696 Theobroma cacao
Thecc1EG041948 5.0kb upstream 5.0kb upstream 6403 true scaffold_9: 40276697-40283099 Theobroma cacao
Thecc1EG041948 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40278100-40283099 Theobroma cacao
Thecc1EG041948 5.0kb downstream 5.0kb downstream 6403 true scaffold_9: 40271697-40278099 Theobroma cacao
Thecc1EG041948 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40271697-40276696 Theobroma cacao
Thecc1EG041948 10.0kb upstream 10.0kb upstream 11403 true scaffold_9: 40276697-40288099 Theobroma cacao
Thecc1EG041948 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40278100-40288099 Theobroma cacao
Thecc1EG041948 10.0kb downstream 10.0kb downstream 11403 true scaffold_9: 40266697-40278099 Theobroma cacao
Thecc1EG041948 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40266697-40276696 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826652 5264 Brassicales-Malvales View MSA
124349622 5266 SBM View MSA
124246555 5268 Malvidae View MSA
124072600 5270 Rosid View MSA
123749602 5271 Pentapetalae View MSA
122797171 5272 Eudicot View MSA
122049953 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain