Gene : Thecc1EG041933 T. cacao v1.1
Defline:  (1 of 1) K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) Genomic Order:  3248
Name:  ? Thecc1EG041933 Secondary Identifier:  ? PAC:27428371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041933 0.5kb upstream 0.5kb upstream 6920 true scaffold_9: 40193518-40200437 Theobroma cacao
Thecc1EG041933 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40199938-40200437 Theobroma cacao
Thecc1EG041933 0.5kb downstream 0.5kb downstream 6920 true scaffold_9: 40193018-40199937 Theobroma cacao
Thecc1EG041933 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40193018-40193517 Theobroma cacao
Thecc1EG041933 1.0kb upstream 1.0kb upstream 7420 true scaffold_9: 40193518-40200937 Theobroma cacao
Thecc1EG041933 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40199938-40200937 Theobroma cacao
Thecc1EG041933 1.0kb downstream 1.0kb downstream 7420 true scaffold_9: 40192518-40199937 Theobroma cacao
Thecc1EG041933 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40192518-40193517 Theobroma cacao
Thecc1EG041933 2.0kb upstream 2.0kb upstream 8420 true scaffold_9: 40193518-40201937 Theobroma cacao
Thecc1EG041933 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40199938-40201937 Theobroma cacao
Thecc1EG041933 2.0kb downstream 2.0kb downstream 8420 true scaffold_9: 40191518-40199937 Theobroma cacao
Thecc1EG041933 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40191518-40193517 Theobroma cacao
Thecc1EG041933 5.0kb upstream 5.0kb upstream 11420 true scaffold_9: 40193518-40204937 Theobroma cacao
Thecc1EG041933 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40199938-40204937 Theobroma cacao
Thecc1EG041933 5.0kb downstream 5.0kb downstream 11420 true scaffold_9: 40188518-40199937 Theobroma cacao
Thecc1EG041933 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40188518-40193517 Theobroma cacao
Thecc1EG041933 10.0kb upstream 10.0kb upstream 16420 true scaffold_9: 40193518-40209937 Theobroma cacao
Thecc1EG041933 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40199938-40209937 Theobroma cacao
Thecc1EG041933 10.0kb downstream 10.0kb downstream 16420 true scaffold_9: 40183518-40199937 Theobroma cacao
Thecc1EG041933 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40183518-40193517 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833461 5264 Brassicales-Malvales View MSA
124341696 5266 SBM View MSA
124240449 5268 Malvidae View MSA
124067266 5270 Rosid View MSA
123746622 5271 Pentapetalae View MSA
122792157 5272 Eudicot View MSA
122049800 5273 Angiosperm View MSA
121348841 5274 Embryophyte View MSA
123428233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain