Gene : Thecc1EG041905 T. cacao v1.1
Defline:  (1 of 2) 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Genomic Order:  3224
Name:  ? Thecc1EG041905 Secondary Identifier:  ? PAC:27429419
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5080 Theobroma cacao pathologic  
Tcacao PWY-6433 Theobroma cacao pathologic  
Tcacao PWY-6598 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-7601 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7619 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041905 0.5kb upstream 0.5kb upstream 3934 true scaffold_9: 40052224-40056157 Theobroma cacao
Thecc1EG041905 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40052224-40052723 Theobroma cacao
Thecc1EG041905 0.5kb downstream 0.5kb downstream 3934 true scaffold_9: 40052724-40056657 Theobroma cacao
Thecc1EG041905 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40056158-40056657 Theobroma cacao
Thecc1EG041905 1.0kb upstream 1.0kb upstream 4434 true scaffold_9: 40051724-40056157 Theobroma cacao
Thecc1EG041905 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40051724-40052723 Theobroma cacao
Thecc1EG041905 1.0kb downstream 1.0kb downstream 4434 true scaffold_9: 40052724-40057157 Theobroma cacao
Thecc1EG041905 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40056158-40057157 Theobroma cacao
Thecc1EG041905 2.0kb upstream 2.0kb upstream 5434 true scaffold_9: 40050724-40056157 Theobroma cacao
Thecc1EG041905 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40050724-40052723 Theobroma cacao
Thecc1EG041905 2.0kb downstream 2.0kb downstream 5434 true scaffold_9: 40052724-40058157 Theobroma cacao
Thecc1EG041905 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40056158-40058157 Theobroma cacao
Thecc1EG041905 5.0kb upstream 5.0kb upstream 8434 true scaffold_9: 40047724-40056157 Theobroma cacao
Thecc1EG041905 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40047724-40052723 Theobroma cacao
Thecc1EG041905 5.0kb downstream 5.0kb downstream 8434 true scaffold_9: 40052724-40061157 Theobroma cacao
Thecc1EG041905 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40056158-40061157 Theobroma cacao
Thecc1EG041905 10.0kb upstream 10.0kb upstream 13434 true scaffold_9: 40042724-40056157 Theobroma cacao
Thecc1EG041905 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40042724-40052723 Theobroma cacao
Thecc1EG041905 10.0kb downstream 10.0kb downstream 13434 true scaffold_9: 40052724-40066157 Theobroma cacao
Thecc1EG041905 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40056158-40066157 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836753 5264 Brassicales-Malvales View MSA
124349665 5266 SBM View MSA
124243174 5268 Malvidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain